RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 RBMS2Q15434 407 aaKnown RBP9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 Q3ZCU0 254 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 MORN2Q502X0 79 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 NCR3LG1Q68D85 454 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 C1orf122Q6ZSJ8 110 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 VMO1Q7Z5L0 202 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 OR13D1Q8NGV5 346 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 GIMAP1Q8WWP7 306 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 TOMM40LQ969M1 308 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 YPEL2Q96QA6 119 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 PCGF1Q9BSM1 259 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 ABHD14AQ9BUJ0 271 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 CLEC7AQ9BXN2 247 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 TMPRSS13Q9BYE2 586 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 HEXA-AS1Q9H8Q6 139 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 COPZ2Q9P299 210 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 OR2W1Q9Y3N9 320 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 DNAH3Q8TD57 4116 aa9.83□□□□□ -0.84
SHKBP1-213ENST00000597325 TRIM77I1YAP6 450 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 J3QLI3 93 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 TOR1AO14656 332 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 TUSC2O75896 110 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 IGHV3-7P01780 117 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 ZNF735P0CB33 412 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 PRTN3P24158 256 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 BTCP35070 178 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 CCR6P51684 374 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 LY6G6FQ5SQ64 297 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 DHRS11Q6UWP2 260 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 ABHD12Q8N2K0 398 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 Q8N7P7 452 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 TERB2Q8NHR7 220 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 SECTM1Q8WVN6 248 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 LEAP2Q969E1 77 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 MOB3AQ96BX8 217 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 SCGB3A2Q96PL1 93 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 TOLLIPQ9H0E2 274 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 FXYD6Q9H0Q3 95 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 SIRPDQ9H106 197 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 SIRT7Q9NRC8 400 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 PSG11Q9UQ72 335 aa9.82□□□□□ -0.84
SHKBP1-213ENST00000597325 A0A087X0M5 115 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 IGHV2-26A0A0B4J1V2 119 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 A0A1B0GX30 115 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 ITGB1BP1O14713 200 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 OR8U9P0C7N5 309 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 IL3RAP26951 378 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 CD34P28906 385 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 S100GP29377 79 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 SLC6A1P30531 599 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 PRRX1P54821 245 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 PAX8Q06710 450 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 SURF2Q15527 256 aaPredicted RBP9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 ZNF660Q6AZW8 331 aaPredicted RBP9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 LPCAT3Q6P1A2 487 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 FAHD2BQ6P2I3 314 aaPredicted RBP9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 NRARPQ7Z6K4 114 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 LHFPL1Q86WI0 220 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 PNKDQ8N490 385 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 C11orf42Q8N5U0 333 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 OR10X1Q8NGY0 326 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 OR8U1Q8NH10 309 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 OR9G1Q8NH87 305 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 ZNF596Q8TC21 504 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 ZFAND1Q8TCF1 268 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 FAHD2AQ96GK7 314 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 SLC25A21Q9BQT8 299 aaPredicted RBP9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 SLC5A7Q9GZV3 580 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 OR2D2Q9H210 308 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 C7orf69Q9H7B7 122 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 ZNF221Q9UK13 617 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 C14orf166Q9Y224 244 aaKnown RBP9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 AMMECR1Q9Y4X0 333 aaPredicted RBP9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 AUP1Q9Y679 476 aa9.81□□□□□ -0.84
SHKBP1-213ENST00000597325 A0A1W2PPE3 182 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 OR5H14A6NHG9 310 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 ST8SIA5O15466 376 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 SLC22A5O76082 557 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 NDUFB6O95139 128 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 RLN1P04808 185 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 MMP9P14780 707 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 GPR12P47775 334 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 UCP3P55916 312 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 TRIM16LQ309B1 348 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 ABCA11PQ4W5N1 156 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 AADACL3Q5VUY0 350 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 FAM53AQ6NSI3 398 aaPredicted RBP9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 PLET1Q6UQ28 207 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 SLC25A48Q6ZT89 311 aaKnown RBP9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 SLC38A6Q8IZM9 456 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 LYG1Q8N1E2 194 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 ZDHHC22Q8N966 263 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 C8orf31Q8N9H6 132 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 ZNF439Q8NDP4 499 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 OR13C8Q8NGS7 320 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 MARCH1Q8TCQ1 289 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 ZNF418Q8TF45 676 aaPredicted RBP9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 TNFRSF14Q92956 283 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 PARP12Q9H0J9 701 aaKnown RBP9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 UNKLQ9H9P5 680 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms