RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 IFI27L2Q9H2X8 130 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 ABCB10Q9NRK6 738 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 NECAP2Q9NVZ3 263 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 PIPOXQ9P0Z9 390 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 MTFP1Q9UDX5 166 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 SAA2-SAA4A0A096LPE2 208 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 A0A1W2PPI3 338 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 H3BUX3 64 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 TRIM77I1YAP6 450 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 TIMM23O14925 209 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 ST8SIA5O15466 376 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 TXNL1O43396 289 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 RBBP9O75884 186 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 RNASE1P07998 156 aaKnown RBP6.73□□□□□ -1.33
VRK3-211ENST00000596445 OR8U9P0C7N5 309 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 SAA2P0DJI9 122 aaPredicted RBP6.73□□□□□ -1.33
VRK3-211ENST00000596445 OR5H8P0DN80 308 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 PTBP1P26599 531 aaKnown RBP eCLIP6.73□□□□□ -1.33
VRK3-211ENST00000596445 BRS3P32247 399 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 ETV6P41212 452 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 OR3A3P47888 321 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 RAB13P51153 203 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 ACTBP60709 375 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 ACTG1P63261 375 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 DGCR2P98153 550 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 SSBP1Q04837 148 aaKnown RBP6.73□□□□□ -1.33
VRK3-211ENST00000596445 CDK10Q15131 360 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 CNPY1Q3B7I2 92 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 RNASE12Q5GAN4 147 aaKnown RBP6.73□□□□□ -1.33
VRK3-211ENST00000596445 SPANXN2Q5MJ10 180 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 FAM71F2Q6NXP2 309 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 C16orf87Q6PH81 154 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 FAM131AQ6UXB0 335 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 ZNF833PQ6ZTB9 187 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 OVCH2Q7RTZ1 564 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 TGIF2LXQ8IUE1 241 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 LYSMD2Q8IV50 215 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 OR6Q1Q8NGQ2 317 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 OR5H2Q8NGV7 314 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 OR8U1Q8NH10 309 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 PIFOQ8TCI5 191 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 ZFAND2BQ8WV99 257 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 SMIM4Q8WVI0 70 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 RTN4IP1Q8WWV3 396 aaPredicted RBP6.73□□□□□ -1.33
VRK3-211ENST00000596445 ABHD14BQ96IU4 210 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 DUX5Q96PT3 197 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 S1PR3Q99500 378 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 CHIAQ9BZP6 476 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 TNFRSF19Q9NS68 423 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 KLK11Q9UBX7 282 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 ZNF107Q9UII5 783 aaPredicted RBP6.73□□□□□ -1.33
VRK3-211ENST00000596445 ZNF221Q9UK13 617 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 VPREB3Q9UKI3 123 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 RNF150Q9ULK6 438 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 OR2W1Q9Y3N9 320 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 V9GYH0 126 aa6.73□□□□□ -1.33
VRK3-211ENST00000596445 IGHV1-3A0A0C4DH29 117 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 ZNF736B4DX44 427 aaPredicted RBP6.72□□□□□ -1.33
VRK3-211ENST00000596445 GSTZ1O43708 216 aaPredicted RBP6.72□□□□□ -1.33
VRK3-211ENST00000596445 TUSC2O75896 110 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 PMP2P02689 132 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 TBPP20226 339 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 NFYAP23511 347 aaPredicted RBP6.72□□□□□ -1.33
VRK3-211ENST00000596445 HLA-DMAP28067 261 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 HRH1P35367 487 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 GPR12P47775 334 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 REG1BP48304 166 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 RFX2P48378 723 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 LUMP51884 338 aaPredicted RBP6.72□□□□□ -1.33
VRK3-211ENST00000596445 SRSF2Q01130 221 aaKnown RBP6.72□□□□□ -1.33
VRK3-211ENST00000596445 DYRK1AQ13627 763 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 HABP2Q14520 560 aaPredicted RBP6.72□□□□□ -1.33
VRK3-211ENST00000596445 DHRS11Q6UWP2 260 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 LIAT1Q6ZQX7 453 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 MOB3BQ86TA1 216 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 THNSL2Q86YJ6 484 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 DRAM1Q8N682 238 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.72□□□□□ -1.33
VRK3-211ENST00000596445 GIMAP1Q8WWP7 306 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 CFHR4Q92496 578 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 ZNF251Q9BRH9 671 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 OR2D2Q9H210 308 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 EHFQ9NZC4 300 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 PITPNC1Q9UKF7 332 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 GAB2Q9UQC2 676 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 TCF19Q9Y242 345 aa6.72□□□□□ -1.33
VRK3-211ENST00000596445 RBMX2Q9Y388 322 aaKnown RBP6.72□□□□□ -1.33
VRK3-211ENST00000596445 RBM7Q9Y580 266 aaKnown RBP6.72□□□□□ -1.33
VRK3-211ENST00000596445 A6NDX4 124 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 FAM90A9PA6NNJ1 464 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 GPR137BO60478 399 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 SLC22A5O76082 557 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 FAM106CPP0CH98 169 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 CD24P25063 80 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 CD1BP29016 333 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 FCGR2CP31995 323 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 RPL15P61313 204 aaKnown RBP6.71□□□□□ -1.34
VRK3-211ENST00000596445 ZNF79Q15937 498 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 LY6EQ16553 131 aa6.71□□□□□ -1.34
VRK3-211ENST00000596445 ACTBL2Q562R1 376 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms