RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 FAM90A9PA6NNJ1 464 aa12.66□□□□□ -0.38
USHBP1-206ENST00000596436 K7EIL1 84 aa12.66□□□□□ -0.38
USHBP1-206ENST00000596436 SSX5O60225 188 aa12.66□□□□□ -0.38
USHBP1-206ENST00000596436 TMEM127O75204 238 aa12.66□□□□□ -0.38
USHBP1-206ENST00000596436 IGLL1P15814 213 aa12.66□□□□□ -0.38
USHBP1-206ENST00000596436 MNDAP41218 407 aa12.66□□□□□ -0.38
USHBP1-206ENST00000596436 RAB7AP51149 207 aa12.66□□□□□ -0.38
USHBP1-206ENST00000596436 ARHGDIBP52566 201 aa12.66□□□□□ -0.38
USHBP1-206ENST00000596436 MRPS15P82914 257 aaKnown RBP12.66□□□□□ -0.38
USHBP1-206ENST00000596436 LY6G6FQ5SQ64 297 aa12.66□□□□□ -0.38
USHBP1-206ENST00000596436 HACD4Q5VWC8 232 aa12.66□□□□□ -0.38
USHBP1-206ENST00000596436 STEAP3Q658P3 488 aa12.66□□□□□ -0.38
USHBP1-206ENST00000596436 OR8H3Q8N146 312 aa12.66□□□□□ -0.38
USHBP1-206ENST00000596436 NUDCD2Q8WVJ2 157 aa12.66□□□□□ -0.38
USHBP1-206ENST00000596436 RTN4IP1Q8WWV3 396 aaPredicted RBP12.66□□□□□ -0.38
USHBP1-206ENST00000596436 RBMXL1Q96E39 390 aaKnown RBP12.66□□□□□ -0.38
USHBP1-206ENST00000596436 IFI27L2Q9H2X8 130 aa12.66□□□□□ -0.38
USHBP1-206ENST00000596436 SLC23A1Q9UHI7 598 aa12.66□□□□□ -0.38
USHBP1-206ENST00000596436 MGAT4AQ9UM21 535 aa12.66□□□□□ -0.38
USHBP1-206ENST00000596436 ST8SIA5O15466 376 aa12.65□□□□□ -0.38
USHBP1-206ENST00000596436 SCGNO76038 276 aa12.65□□□□□ -0.38
USHBP1-206ENST00000596436 GAPDHP04406 335 aaKnown RBP12.65□□□□□ -0.38
USHBP1-206ENST00000596436 SNRNP70P08621 437 aaKnown RBP12.65□□□□□ -0.38
USHBP1-206ENST00000596436 GSTP1P09211 210 aaKnown RBP12.65□□□□□ -0.38
USHBP1-206ENST00000596436 GSTT2P0CG29 244 aa12.65□□□□□ -0.38
USHBP1-206ENST00000596436 GSTT2BP0CG30 244 aa12.65□□□□□ -0.38
USHBP1-206ENST00000596436 IL3RAP26951 378 aa12.65□□□□□ -0.38
USHBP1-206ENST00000596436 TMEM95Q3KNT9 176 aa12.65□□□□□ -0.38
USHBP1-206ENST00000596436 TCTEX1D4Q5JR98 221 aa12.65□□□□□ -0.38
USHBP1-206ENST00000596436 CAPSLQ8WWF8 208 aa12.65□□□□□ -0.38
USHBP1-206ENST00000596436 DCSTAMPQ9H295 470 aa12.65□□□□□ -0.38
USHBP1-206ENST00000596436 TRAV18A0A075B6X5 111 aa12.64□□□□□ -0.39
USHBP1-206ENST00000596436 IGHV3-72A0A0B4J1Y9 119 aa12.64□□□□□ -0.39
USHBP1-206ENST00000596436 FABP7O15540 132 aa12.64□□□□□ -0.39
USHBP1-206ENST00000596436 RGS11O94810 467 aa12.64□□□□□ -0.39
USHBP1-206ENST00000596436 CD33P20138 364 aa12.64□□□□□ -0.39
USHBP1-206ENST00000596436 VDAC2P45880 294 aaPredicted RBP12.64□□□□□ -0.39
USHBP1-206ENST00000596436 ARL6IP1Q15041 203 aa12.64□□□□□ -0.39
USHBP1-206ENST00000596436 IGSF11Q5DX21 431 aa12.64□□□□□ -0.39
USHBP1-206ENST00000596436 MOB3BQ86TA1 216 aa12.64□□□□□ -0.39
USHBP1-206ENST00000596436 CLVS1Q8IUQ0 354 aaPredicted RBP12.64□□□□□ -0.39
USHBP1-206ENST00000596436 SAMD12Q8N8I0 201 aa12.64□□□□□ -0.39
USHBP1-206ENST00000596436 OR2AK2Q8NG84 335 aa12.64□□□□□ -0.39
USHBP1-206ENST00000596436 OR4A4PQ8NGN8 299 aa12.64□□□□□ -0.39
USHBP1-206ENST00000596436 SLC25A33Q9BSK2 321 aa12.64□□□□□ -0.39
USHBP1-206ENST00000596436 CABLES2Q9BTV7 478 aa12.64□□□□□ -0.39
USHBP1-206ENST00000596436 ABCG5Q9H222 651 aa12.64□□□□□ -0.39
USHBP1-206ENST00000596436 SAA2-SAA4A0A096LPE2 208 aa12.63□□□□□ -0.39
USHBP1-206ENST00000596436 ZNF736B4DX44 427 aaPredicted RBP12.63□□□□□ -0.39
USHBP1-206ENST00000596436 LANCL1O43813 399 aa12.63□□□□□ -0.39
USHBP1-206ENST00000596436 PEX14O75381 377 aa12.63□□□□□ -0.39
USHBP1-206ENST00000596436 IGKV1D-33P01593 117 aa12.63□□□□□ -0.39
USHBP1-206ENST00000596436 IGKV1-33P01594 117 aa12.63□□□□□ -0.39
USHBP1-206ENST00000596436 SAA2P0DJI9 122 aaPredicted RBP12.63□□□□□ -0.39
USHBP1-206ENST00000596436 PTHLHP12272 177 aa12.63□□□□□ -0.39
USHBP1-206ENST00000596436 DTYMKP23919 212 aa12.63□□□□□ -0.39
USHBP1-206ENST00000596436 ZBTB25P24278 435 aa12.63□□□□□ -0.39
USHBP1-206ENST00000596436 TALDO1P37837 337 aa12.63□□□□□ -0.39
USHBP1-206ENST00000596436 OR3A3P47888 321 aa12.63□□□□□ -0.39
USHBP1-206ENST00000596436 SPCS2Q15005 226 aa12.63□□□□□ -0.39
USHBP1-206ENST00000596436 UBE2NLQ5JXB2 153 aa12.63□□□□□ -0.39
USHBP1-206ENST00000596436 Q6ZS49 121 aa12.63□□□□□ -0.39
USHBP1-206ENST00000596436 THNSL2Q86YJ6 484 aa12.63□□□□□ -0.39
USHBP1-206ENST00000596436 TGIF2LXQ8IUE1 241 aa12.63□□□□□ -0.39
USHBP1-206ENST00000596436 OR5AU1Q8NGC0 362 aa12.63□□□□□ -0.39
USHBP1-206ENST00000596436 KCTD12Q96CX2 325 aaKnown RBP12.63□□□□□ -0.39
USHBP1-206ENST00000596436 RBM14Q96PK6 669 aaKnown RBP12.63□□□□□ -0.39
USHBP1-206ENST00000596436 C11orf54Q9H0W9 315 aaPredicted RBP12.63□□□□□ -0.39
USHBP1-206ENST00000596436 A0A0A6YYH2 397 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 A6NJ64 397 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 OR2F2O95006 317 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 AMY1AP04745 511 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 AMY2AP04746 511 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 EIF4EP06730 217 aaKnown RBP12.62□□□□□ -0.39
USHBP1-206ENST00000596436 FAM106CPP0CH98 169 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 CEACAM6P40199 344 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 RPL5P46777 297 aaKnown RBP12.62□□□□□ -0.39
USHBP1-206ENST00000596436 GNG2P59768 71 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 EGFEM1PQ0D2K5 195 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 KIR2DS1Q14954 304 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 SRSF7Q16629 238 aaKnown RBP eCLIP12.62□□□□□ -0.39
USHBP1-206ENST00000596436 PNLIPRP3Q17RR3 467 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 C11orf87Q6NUJ2 197 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 ZNF833PQ6ZTB9 187 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 C16orf82Q7Z2V1 217 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 RCC1LQ96I51 464 aaKnown RBP12.62□□□□□ -0.39
USHBP1-206ENST00000596436 ABHD14BQ96IU4 210 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 ZNF251Q9BRH9 671 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 AGMATQ9BSE5 352 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 ST6GALNAC5Q9BVH7 336 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 MRPL20Q9BYC9 149 aaKnown RBP12.62□□□□□ -0.39
USHBP1-206ENST00000596436 TOLLIPQ9H0E2 274 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 AUNIPQ9H7T9 357 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 RDH8Q9NYR8 311 aa12.62□□□□□ -0.39
USHBP1-206ENST00000596436 TRBV6-7A0A0A0MS04 114 aa12.61□□□□□ -0.39
USHBP1-206ENST00000596436 SH2D7A6NKC9 451 aaPredicted RBP12.61□□□□□ -0.39
USHBP1-206ENST00000596436 ITGB1BP1O14713 200 aa12.61□□□□□ -0.39
USHBP1-206ENST00000596436 BET1O15155 118 aa12.61□□□□□ -0.39
USHBP1-206ENST00000596436 HSPA12AO43301 675 aa12.61□□□□□ -0.39
USHBP1-206ENST00000596436 DUS4LO95620 317 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms