RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 OR4D10Q8NGI6 311 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 RTN4IP1Q8WWV3 396 aaPredicted RBP8.48□□□□□ -1.05
LIG1-210ENST00000596332 MRGPRFQ96AM1 343 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 RITA1Q96K30 269 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 SSX3Q99909 188 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 ABHD14AQ9BUJ0 271 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 RAB9BQ9NP90 201 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 RNF150Q9ULK6 438 aa8.48□□□□□ -1.05
LIG1-210ENST00000596332 SAA2-SAA4A0A096LPE2 208 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 A6NDX4 124 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 FABP12A6NFH5 140 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 OOSP1A8MZH6 123 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 H3BUX3 64 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 TCF21O43680 179 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 CHST1O43916 411 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 CD74P04233 296 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 OR8U9P0C7N5 309 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 SAA2P0DJI9 122 aaPredicted RBP8.47□□□□□ -1.05
LIG1-210ENST00000596332 CT45A6P0DMU7 189 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 CT45A5P0DMU8 189 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 CT45A7P0DMV0 189 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 HLA-DMAP28067 261 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 REG1BP48304 166 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 LGALS4P56470 323 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 BRWD1-AS2P59051 145 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 RELBQ01201 579 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 DYRK1AQ13627 763 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 KRTAP24-1Q3LI83 254 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 PLA1AQ53H76 456 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 RNASE12Q5GAN4 147 aaKnown RBP8.47□□□□□ -1.05
LIG1-210ENST00000596332 TMEM86BQ8N661 226 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 Q8N6K4 173 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 OR8U1Q8NH10 309 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 OR10J5Q8NHC4 309 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 ZNF418Q8TF45 676 aaPredicted RBP8.47□□□□□ -1.05
LIG1-210ENST00000596332 GIMAP1Q8WWP7 306 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 TRIM63Q969Q1 353 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 NABP2Q9BQ15 211 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 PTTG2Q9NZH5 202 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 FAM96BQ9Y3D0 163 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 OR2W1Q9Y3N9 320 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 POMT1Q9Y6A1 747 aa8.47□□□□□ -1.05
LIG1-210ENST00000596332 HSD17B6O14756 317 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 TIMM23O14925 209 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 RGS11O94810 467 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 PMP2P02689 132 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 CD3DP04234 171 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 AMY1AP04745 511 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 AMY2AP04746 511 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 RNASE1P07998 156 aaKnown RBP8.46□□□□□ -1.06
LIG1-210ENST00000596332 CTXN2P0C2S0 81 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 OR5H8P0DN80 308 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 AADACP22760 399 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 IL18Q14116 193 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 CDK10Q15131 360 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 LRRC75BQ2VPJ9 315 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 AADACL3Q5VUY0 350 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 THNSL2Q86YJ6 484 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 LYG1Q8N1E2 194 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 DRAM1Q8N682 238 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 OR2AK2Q8NG84 335 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 SSMEM1Q8WWF3 244 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 MRPL20Q9BYC9 149 aaKnown RBP8.46□□□□□ -1.06
LIG1-210ENST00000596332 TINAGL1Q9GZM7 467 aaPredicted RBP8.46□□□□□ -1.06
LIG1-210ENST00000596332 SRRQ9GZT4 340 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 AKIP1Q9NQ31 210 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 PLSCR3Q9NRY6 295 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 SDHAF2Q9NX18 166 aa8.46□□□□□ -1.06
LIG1-210ENST00000596332 TENM1Q9UKZ4 2725 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 IGHV3-72A0A0B4J1Y9 119 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 M0QYG6 137 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 HSPA12AO43301 675 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 RBBP9O75884 186 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 GAPDHP04406 335 aaKnown RBP8.45□□□□□ -1.06
LIG1-210ENST00000596332 PTBP1P26599 531 aaKnown RBP eCLIP8.45□□□□□ -1.06
LIG1-210ENST00000596332 FCGR2CP31995 323 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 RCVRNP35243 200 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 HRH1P35367 487 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 CEACAM3P40198 252 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 RAB7AP51149 207 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 RIPPLY3P57055 190 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 MRPS10P82664 201 aaKnown RBP8.45□□□□□ -1.06
LIG1-210ENST00000596332 LSAMPQ13449 338 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 BAK1Q16611 211 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 VAX1Q5SQQ9 334 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 C16orf87Q6PH81 154 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 FAM131AQ6UXB0 335 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 Q6ZS46 218 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 LHFPL1Q86WI0 220 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 OR8H3Q8N146 312 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 ZNF383Q8NA42 475 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 TMEM229BQ8NBD8 167 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 OR5AN1Q8NGI8 311 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 OR10X1Q8NGY0 326 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 C15orf40Q8WUR7 153 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 FCAMRQ8WWV6 532 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 EDARADDQ8WWZ3 215 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 DDB2Q92466 427 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 CREB3L1Q96BA8 519 aa8.45□□□□□ -1.06
LIG1-210ENST00000596332 MDFIQ99750 246 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms