RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 GPR87Q9BY21 358 aa12.58□□□□□ -0.39
SMARCA4-219ENST00000592604 PKIBQ9C010 78 aa12.58□□□□□ -0.39
SMARCA4-219ENST00000592604 SLC39A9Q9NUM3 307 aa12.58□□□□□ -0.39
SMARCA4-219ENST00000592604 A0A087X0M5 115 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 A0A1B0GX30 115 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 MKRN2OSH3BPM6 223 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 KBTBD11O94819 623 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 APLNRP35414 380 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 GNG3P63215 75 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 MEF2BQ02080 365 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 C9orf135Q5VTT2 229 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 Q6P435 159 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 C16orf82Q7Z2V1 217 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 C17orf78Q8N4C9 275 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 IL1F10Q8WWZ1 152 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 FAM122AQ96E09 287 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 TMEM9BQ9NQ34 198 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 LIN7CQ9NUP9 197 aaKnown RBP12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 TP53TG5Q9Y2B4 290 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 TMEM250H0YL14 139 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 FOXG1P55316 489 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 TMEM14EPQ6UXP3 125 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 MOB1BQ7L9L4 216 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 OR51G1Q8NGK1 321 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 PPP1R3CQ9UQK1 317 aa12.58□□□□□ -0.4
SMARCA4-219ENST00000592604 IGKV1D-33P01593 117 aa12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 IGKV1-33P01594 117 aa12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 CD55P08174 381 aa12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 MDKP21741 143 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 COL10A1Q03692 680 aa12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 ADIRFQ15847 76 aa12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 BSXQ3C1V8 233 aa12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 SPANXN5Q5MJ07 72 aa12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 TIPARPQ7Z3E1 657 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 OR1P1Q8NH06 330 aa12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 PRO1933Q9H354 126 aa12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 UBE2ZQ9H832 354 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 ESPL1Q14674 2120 aa12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 ANKRD30BLA7E2S9 258 aa12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 AMBPP02760 352 aa12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 ARR3P36575 388 aa12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 ELLP55199 621 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 RPL23P62829 140 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 SLC38A11Q08AI6 406 aa12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 ACTR3CQ9C0K3 210 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 SMOC1Q9H4F8 434 aa12.57□□□□□ -0.4
SMARCA4-219ENST00000592604 WDFY3Q8IZQ1 3526 aa12.56□□□□□ -0.4
SMARCA4-219ENST00000592604 TUSC5Q8IXB3 177 aa12.56□□□□□ -0.4
SMARCA4-219ENST00000592604 OR51I2Q9H344 312 aa12.56□□□□□ -0.4
SMARCA4-219ENST00000592604 PILRBQ9UKJ0 227 aa12.56□□□□□ -0.4
SMARCA4-219ENST00000592604 A8MXE2 369 aa12.56□□□□□ -0.4
SMARCA4-219ENST00000592604 B4E171 279 aa12.56□□□□□ -0.4
SMARCA4-219ENST00000592604 LILRA1O75019 489 aa12.56□□□□□ -0.4
SMARCA4-219ENST00000592604 GZMBP10144 247 aa12.56□□□□□ -0.4
SMARCA4-219ENST00000592604 CYB561P49447 251 aa12.56□□□□□ -0.4
SMARCA4-219ENST00000592604 LBHQ53QV2 105 aaPredicted RBP12.56□□□□□ -0.4
SMARCA4-219ENST00000592604 GZMHP20718 246 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 FGF7P21781 194 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 TNFRSF9Q07011 255 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 OR1K1Q8NGR3 316 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 GOLT1BQ9Y3E0 138 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 UBE2L5PA0A1B0GUS4 154 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 ZNF25P17030 456 aaPredicted RBP12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 PSMB3P49720 205 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 LHX2P50458 406 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 PDLIM4P50479 330 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 ZNF497Q6ZNH5 498 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 FGFRL1Q8N441 504 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 DOCK10Q96BY6 2186 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 CTXND1A0A1B0GTU2 59 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 C3orf80F5H4A9 247 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 RHBDL1O75783 438 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 OTX2P32243 289 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 CEACAM6P40199 344 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 ATP6V1FQ16864 119 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 ACSM6Q6P461 480 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 ACY3Q96HD9 319 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 BOKQ9UMX3 212 aaPredicted RBP12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 LAMP3Q9UQV4 416 aa12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 RBM7Q9Y580 266 aaKnown RBP12.55□□□□□ -0.4
SMARCA4-219ENST00000592604 TRAV39A0A0B4J263 110 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 H7BYZ3 331 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 J3QT63 122 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 SOX15O60248 233 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 ZNF16P17020 682 aaPredicted RBP12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 HNF1AP20823 631 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 GALR1P47211 349 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 CLDN18P56856 261 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 PLP2Q04941 152 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 DRAM1Q8N682 238 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 ANAPC16Q96DE5 110 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 OR5B12Q96R08 314 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 HSPB7Q9UBY9 170 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 HSBP1L1C9JCN9 74 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 PPP5D1E7EU14 171 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 FAM3BP58499 235 aaPredicted RBP12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 PMS2CLQ68D20 193 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 TMEM170AQ8WVE7 144 aa12.54□□□□□ -0.4
SMARCA4-219ENST00000592604 RAB24Q969Q5 203 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms