RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 HIST1H2BKO60814 126 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 HIST1H2BJP06899 126 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 HIST1H2BOP23527 126 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 HIST1H2BBP33778 126 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 KLF3P57682 345 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 HIST1H2BDP58876 126 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 HIST1H2BCP62807 126 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 HIST2H2BEQ16778 126 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 HIST1H2BHQ93079 126 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 HIST1H2BNQ99877 126 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 HIST1H2BMQ99879 126 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 LINC00869P0C866 280 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 CCL11P51671 97 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 HEPN1Q6WQI6 88 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 C16orf47Q6ZP98 133 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 TMEM170AQ8WVE7 144 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 PCOLCE2Q9UKZ9 415 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 DNPH1O43598 174 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 LMX1BO60663 402 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 GCSHP23434 173 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 PEBP1P30086 187 aaKnown RBP12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 RPL30P62888 115 aaKnown RBP12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 TMEM70Q9BUB7 260 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 LAMTOR2Q9Y2Q5 125 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 CNTRLQ7Z7A1 2325 aa12.66□□□□□ -0.38
SMARCA4-214ENST00000589677 RAMP1O60894 148 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 MAS1LP35410 378 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 DNLZQ5SXM8 178 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 THYN1Q9P016 225 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 UFC1Q9Y3C8 167 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 ADAMTSL1Q8N6G6 1762 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 TMEM210A6NLX4 147 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 B4E171 279 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 DLX1P56177 255 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 SMAD4Q13485 552 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 LY6G6FQ5SQ64 297 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 CLDND2Q8NHS1 167 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 KCNK17Q96T54 332 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 NUTF2P61970 127 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 FAM27BQ5VT28 67 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 OR2M3Q8NG83 312 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 ABHD3Q8WU67 409 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 RPRMQ9NS64 109 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 TMEM140Q9NV12 185 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 ZNF256Q9Y2P7 627 aaPredicted RBP12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 TTC32Q5I0X7 151 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 NR2C2APQ86WQ0 139 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 ATOH7Q8N100 152 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 OR2I1PQ8NGU4 316 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 OR2Y1Q8NGV0 311 aa12.65□□□□□ -0.38
SMARCA4-214ENST00000589677 S1PR2O95136 353 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 SCTP09683 121 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 NPBWR2P48146 333 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 PPP1CAP62136 330 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 SNRNP40Q96DI7 357 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 TM4SF19Q96DZ7 209 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 RCC1LQ96I51 464 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 Q96M66 194 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 RNF126Q9BV68 326 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 CBLN1P23435 193 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 J3QR06 171 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 SMIM13P0DJ93 91 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 GABRG2P18507 467 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 OR10AG1Q8NH19 301 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 SIT1Q9Y3P8 196 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 TBL2Q9Y4P3 447 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 TRAV38-1A0A0B4J264 116 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 WNT5AP41221 380 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 OR1L8Q8NGR8 309 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 ZPBPQ9BS86 351 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 GPR35Q9HC97 309 aa12.64□□□□□ -0.39
SMARCA4-214ENST00000589677 IGKV1-8A0A0C4DH67 115 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 F5H697 171 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 CDIPTO14735 213 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 CRYABP02511 175 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 CD5P06127 495 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 KIAA1644Q3SXP7 199 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 FGFRL1Q8N441 504 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 IL36BQ9NZH7 164 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 PCM1Q15154 2024 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 IGHV1OR21-1A0A087WYE8 117 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 ALKBH6Q3KRA9 238 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 HIST3H2BBQ8N257 126 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 BEND2Q8NDZ0 799 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 WNK3Q9BYP7 1800 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 LINC00614P0C842 121 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 SPSB2Q99619 263 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 C2orf88Q9BSF0 95 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 OR51B2Q9Y5P1 312 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 COL11A2P13942 1736 aaPredicted RBP12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 MEX3AA1L020 520 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 MS4A18H0YCH9 400 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 LIPFP07098 398 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 ARL14EPLP0DKL9 152 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 MS4A18Q3C1V0 323 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 CEACAM21Q3KPI0 293 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 ZNF645Q8N7E2 425 aa12.63□□□□□ -0.39
SMARCA4-214ENST00000589677 LOC389332A0A1B0GUA5 103 aa12.62□□□□□ -0.39
SMARCA4-214ENST00000589677 PTPRFP10586 1907 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms