RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-218	ENST00000583821	MRPL20	Q9BYC9	149 aa	Known RBP	6.29	□□□□□ -1.4
MSI2-218	ENST00000583821	ALX4	Q9H161	411 aa	Predicted RBP	6.29	□□□□□ -1.4
MSI2-218	ENST00000583821	BANF2	Q9H503	90 aa		6.29	□□□□□ -1.4
MSI2-218	ENST00000583821	PARP11	Q9NR21	331 aa		6.29	□□□□□ -1.4
MSI2-218	ENST00000583821	ZNF107	Q9UII5	783 aa	Predicted RBP	6.29	□□□□□ -1.4
MSI2-218	ENST00000583821	TRAPPC2L	Q9UL33	140 aa		6.29	□□□□□ -1.4
MSI2-218	ENST00000583821	MRPS28	Q9Y2Q9	187 aa	Known RBP	6.29	□□□□□ -1.4
MSI2-218	ENST00000583821	TMA7	Q9Y2S6	64 aa	Known RBP	6.29	□□□□□ -1.4
MSI2-218	ENST00000583821	RPL36	Q9Y3U8	105 aa	Known RBP	6.29	□□□□□ -1.4
MSI2-218	ENST00000583821	PLEC	Q15149	4684 aa	Known RBP	6.29	□□□□□ -1.4
MSI2-218	ENST00000583821	UBE2QL1	A1L167	161 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	FAM25A	B3EWG3	89 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	FAM25C	B3EWG5	89 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	FAM25G	B3EWG6	89 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	BET1	O15155	118 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	ATP6V0E1	O15342	81 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	OGG1	O15527	345 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	SPINT2	O43291	252 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	RAMP3	O60896	148 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	LY86	O95711	162 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	ELANE	P08246	267 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	GTF2F2	P13984	249 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	BLVRB	P30043	206 aa	Predicted RBP	6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	OR3A3	P47888	321 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	ZNF137P	P52743	207 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	NDP	Q00604	133 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	KIAA0141	Q14154	515 aa	Predicted RBP	6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	KIR3DS1	Q14943	382 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	MMD	Q15546	238 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	ZFP1	Q6P2D0	407 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	GLIPR1L1	Q6UWM5	242 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	LINC00299	Q6ZSB3	139 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	CLVS1	Q8IUQ0	354 aa	Predicted RBP	6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	STX19	Q8N4C7	294 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	JAGN1	Q8N5M9	183 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	OR11H1	Q8NG94	326 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	MYOZ3	Q8TDC0	251 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	CASTOR1	Q8WTX7	329 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	ANAPC16	Q96DE5	110 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	PGLYRP3	Q96LB9	341 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	NEURL2	Q9BR09	285 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	SELENOI	Q9C0D9	397 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	KCNK15	Q9H427	330 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	SCPEP1	Q9HB40	452 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	GAR1	Q9NY12	217 aa	Known RBP	6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	RAB26	Q9ULW5	256 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	ZNF256	Q9Y2P7	627 aa	Predicted RBP	6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	FBXO7	Q9Y3I1	522 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	PEX16	Q9Y5Y5	336 aa		6.28	□□□□□ -1.4
MSI2-218	ENST00000583821	ALMS1	Q8TCU4	4167 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	TRBV5-7	A0A0A0MS05	114 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	MCRIP1	C9JLW8	97 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821		I3L521	148 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	TXNL1	O43396	289 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	DENR	O43583	198 aa	Known RBP	6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	LANCL1	O43813	399 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	CRTAP	O75718	401 aa	Predicted RBP	6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	MAS1	P04201	325 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	IGF1	P05019	195 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	NHLRC4	P0CG21	123 aa	Predicted RBP	6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	MGMT	P16455	207 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	SLURP1	P55000	103 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	ACTB	P60709	375 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	MRPS15	P82914	257 aa	Known RBP	6.27	□□□□□ -1.41
MSI2-218	ENST00000583821		Q499Y3	187 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	CCDC58	Q4VC31	144 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	DMKN	Q6E0U4	476 aa	Predicted RBP	6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	AWAT2	Q6E213	333 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	TMPRSS11A	Q6ZMR5	421 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	KRTAP19-1	Q8IUB9	90 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	ODF3L1	Q8IXM7	274 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	GAPT	Q8N292	157 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	PQLC1	Q8N2U9	271 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	CENPS	Q8N2Z9	138 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	ZNF491	Q8N8L2	437 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	ZNF485	Q8NCK3	441 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	ENKUR	Q8TC29	256 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	MRPL30	Q8TCC3	161 aa	Known RBP	6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	FAM46B	Q96A09	425 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	KRTAP4-12	Q9BQ66	201 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	ABHD14A	Q9BUJ0	271 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	GON7	Q9BXV9	100 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	PARP12	Q9H0J9	701 aa	Known RBP	6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	TAF9B	Q9HBM6	251 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	S100A14	Q9HCY8	104 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	ISYNA1	Q9NPH2	558 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	BABAM2	Q9NXR7	383 aa		6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	DIMT1	Q9UNQ2	313 aa	Known RBP	6.27	□□□□□ -1.41
MSI2-218	ENST00000583821	BIRC6	Q9NR09	4857 aa		6.26	□□□□□ -1.41
MSI2-218	ENST00000583821	SAA2-SAA4	A0A096LPE2	208 aa		6.26	□□□□□ -1.41
MSI2-218	ENST00000583821	IGHV7-81	A0A0B4J1V7	117 aa		6.26	□□□□□ -1.41
MSI2-218	ENST00000583821	TRAV41	A0A0B4J266	112 aa		6.26	□□□□□ -1.41
MSI2-218	ENST00000583821	SOX15	O60248	233 aa		6.26	□□□□□ -1.41
MSI2-218	ENST00000583821	ZNF780A	O75290	641 aa	Predicted RBP	6.26	□□□□□ -1.41
MSI2-218	ENST00000583821	GPX5	O75715	221 aa		6.26	□□□□□ -1.41
MSI2-218	ENST00000583821	SC5D	O75845	299 aa		6.26	□□□□□ -1.41
MSI2-218	ENST00000583821	HLA-DRB1	P01911	266 aa		6.26	□□□□□ -1.41
MSI2-218	ENST00000583821	SAA2	P0DJI9	122 aa	Predicted RBP	6.26	□□□□□ -1.41
MSI2-218	ENST00000583821	ATF4	P18848	351 aa	Predicted RBP	6.26	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms