RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 SUCNR1Q9BXA5 334 aa8.96□□□□□ -0.97
TOP3A-216ENST00000583804 ZNF69Q9UC07 566 aa8.96□□□□□ -0.97
TOP3A-216ENST00000583804 SCP2D1Q9UJQ7 156 aa8.96□□□□□ -0.97
TOP3A-216ENST00000583804 SESN1Q9Y6P5 492 aa8.96□□□□□ -0.97
TOP3A-216ENST00000583804 WNK2Q9Y3S1 2297 aa8.96□□□□□ -0.97
TOP3A-216ENST00000583804 IGHV3OR16-10A0A075B7F0 116 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 A0A1W2PPE3 182 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 SNRPGP15A8MWD9 76 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 NPIPB11E5RHQ5 1161 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 NDUFB6O95139 128 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 RBP4P02753 201 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 RLN1P04808 185 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 FPR2P25090 351 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 VAX1Q5SQQ9 334 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 GLDNQ6ZMI3 551 aaPredicted RBP8.96□□□□□ -0.98
TOP3A-216ENST00000583804 OR4A4PQ8NGN8 299 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 OR13C8Q8NGS7 320 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 MARCH1Q8TCQ1 289 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 FXYD6Q9H0Q3 95 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 TMEM133Q9H2Q1 129 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 HEXA-AS1Q9H8Q6 139 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 LINC00574Q9H8X3 128 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 ZNRD1Q9P1U0 126 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 GNG12Q9UBI6 72 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 HSPB11Q9Y547 144 aa8.96□□□□□ -0.98
TOP3A-216ENST00000583804 ZANQ9Y493 2812 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 HIVEP1P15822 2718 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 A0A1W2PRD5 423 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 A0A1W2PRF3 423 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 A0A1W2PRM7 423 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 ANKRD34BA5PLL1 514 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 OR5H14A6NHG9 310 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 HSD17B6O14756 317 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 ANXA7P20073 488 aaKnown RBP8.95□□□□□ -0.98
TOP3A-216ENST00000583804 TBPP20226 339 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 HERV-K104P61576 105 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 KLRD1Q13241 179 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 SRSF7Q16629 238 aaKnown RBP eCLIP8.95□□□□□ -0.98
TOP3A-216ENST00000583804 FAM120AOSQ5T036 256 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 NCR3LG1Q68D85 454 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 C1orf229Q6ZS94 237 aaPredicted RBP8.95□□□□□ -0.98
TOP3A-216ENST00000583804 IL17RELQ6ZVW7 336 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 OVCH2Q7RTZ1 564 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 PNKDQ8N490 385 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 OR10A7Q8NGE5 316 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 OR13D1Q8NGV5 346 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 OR10J5Q8NHC4 309 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 ZNF431Q8TF32 576 aaPredicted RBP8.95□□□□□ -0.98
TOP3A-216ENST00000583804 MRGPRFQ96AM1 343 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 CABLES2Q9BTV7 478 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 GPN1Q9HCN4 374 aaPredicted RBP8.95□□□□□ -0.98
TOP3A-216ENST00000583804 OR2S2Q9NQN1 319 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 RDH8Q9NYR8 311 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 ZNF107Q9UII5 783 aaPredicted RBP8.95□□□□□ -0.98
TOP3A-216ENST00000583804 RNF150Q9ULK6 438 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 VSIG4Q9Y279 399 aa8.95□□□□□ -0.98
TOP3A-216ENST00000583804 CELSR1Q9NYQ6 3014 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 DSCAML1Q8TD84 2053 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 IGKV1D-13A0A0B4J2D9 117 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 RNASEK-C17orf49H0YIS7 233 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 SMLR1H3BR10 107 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 F2RL2O00254 374 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 TOR1AO14656 332 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 ST8SIA5O15466 376 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 SSNA1O43805 119 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 IGKV1-13P0DP09 117 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 HOXB4P17483 251 aaPredicted RBP8.94□□□□□ -0.98
TOP3A-216ENST00000583804 CXCL3P19876 107 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 HNF1AP20823 631 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 SRP14P37108 136 aaKnown RBP8.94□□□□□ -0.98
TOP3A-216ENST00000583804 CEACAM6P40199 344 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 HTD2P86397 168 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 DHODHQ02127 395 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 PHLDA2Q53GA4 152 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 GPR157Q5UAW9 335 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 Q6ZS49 121 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 ABHD12Q8N2K0 398 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 ADAD2Q8NCV1 583 aaKnown RBP8.94□□□□□ -0.98
TOP3A-216ENST00000583804 NANPQ8TBE9 248 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 SECTM1Q8WVN6 248 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 TNFRSF14Q92956 283 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 GPHA2Q96T91 129 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 PRRT1Q99946 306 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 ZNF436Q9C0F3 470 aaPredicted RBP8.94□□□□□ -0.98
TOP3A-216ENST00000583804 UNKLQ9H9P5 680 aaKnown RBP8.94□□□□□ -0.98
TOP3A-216ENST00000583804 GFOD1Q9NXC2 390 aa8.94□□□□□ -0.98
TOP3A-216ENST00000583804 RBM7Q9Y580 266 aaKnown RBP8.94□□□□□ -0.98
TOP3A-216ENST00000583804 TLN2Q9Y4G6 2542 aa8.93□□□□□ -0.98
TOP3A-216ENST00000583804 TRAV40A0A0B4J280 105 aa8.93□□□□□ -0.98
TOP3A-216ENST00000583804 CENPVL3A0A0U1RRI6 287 aa8.93□□□□□ -0.98
TOP3A-216ENST00000583804 SLC31A2O15432 143 aa8.93□□□□□ -0.98
TOP3A-216ENST00000583804 TNFSF12O43508 249 aa8.93□□□□□ -0.98
TOP3A-216ENST00000583804 DIRAS3O95661 229 aa8.93□□□□□ -0.98
TOP3A-216ENST00000583804 PPYP01298 95 aa8.93□□□□□ -0.98
TOP3A-216ENST00000583804 OR8U9P0C7N5 309 aa8.93□□□□□ -0.98
TOP3A-216ENST00000583804 IGHV4-38-2P0DP08 117 aa8.93□□□□□ -0.98
TOP3A-216ENST00000583804 ZBTB25P24278 435 aa8.93□□□□□ -0.98
TOP3A-216ENST00000583804 LOXL3P58215 753 aa8.93□□□□□ -0.98
TOP3A-216ENST00000583804 RBMS2Q15434 407 aaKnown RBP8.93□□□□□ -0.98
TOP3A-216ENST00000583804 TMEM30BQ3MIR4 351 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms