RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 TFF3Q07654 80 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 ZNF585BQ52M93 769 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 SPINK9Q5DT21 86 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 WIPI1Q5MNZ9 446 aaPredicted RBP8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 GBGT1Q8N5D6 347 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 CELSR3Q9NYQ7 3312 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 TRAV24A0A0B4J272 114 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 LILRA1O75019 489 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 NGFP01138 241 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 IGLV2-14P01704 120 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 HNF1AP20823 631 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 PDLIM4P50479 330 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 FOXG1P55316 489 aaPredicted RBP8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 FFAR4Q5NUL3 377 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 TCF23Q7RTU1 214 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 OR10D3Q8NH80 312 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 OR5P3Q8WZ94 311 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 HLA-CQ95604 372 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 SF3B5Q9BWJ5 86 aaKnown RBP8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 C1QTNF5Q9BXJ0 243 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 CLN8Q9UBY8 286 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 FAM90A10PA6NDY2 464 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 FAM90A18PA6NE21 464 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 FAM90A16PA6NEW6 464 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 FAM90A20PA6NIJ5 464 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 FAM90A8PA6NJQ4 464 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 FAM90A7PA6NKC0 464 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 FAM90A22PA8MWA6 464 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 FAM90A12PA8MX19 464 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 FAM90A5PA8MXJ8 464 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 FAM90A23PA8MXZ1 464 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 CBR3O75828 277 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 FAM90A15PP0C7V4 464 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 FAM90A13PP0C7W8 464 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 FAM90A14PP0C7W9 464 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 FAM90A24PP0C7X0 464 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 NPPCP23582 126 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 IL3RAP26951 378 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 MPLP40238 635 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 B3GALT5-AS1P59052 145 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 ERVFC1-1P60608 527 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 GGNQ86UU5 652 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 SMRP1Q8NCR6 262 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 SDSLQ96GA7 329 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 TECTBQ96PL2 329 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 TMEM9BQ9NQ34 198 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 TRAPPC1Q9Y5R8 145 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 IGHV1-45A0A0A0MS14 117 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 SIRPB1O00241 398 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 HOXA6P31267 233 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 TDGF1P3P51864 188 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 ACOT6Q3I5F7 207 aaPredicted RBP8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 CEACAM21Q3KPI0 293 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 MRPL14Q6P1L8 145 aaKnown RBP8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 TMPRSS7Q7RTY8 843 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 RPS19BP1Q86WX3 136 aaKnown RBP8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 Q8NFD4 153 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 SPSB4Q96A44 273 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 PRRG4Q9BZD6 226 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 NAGKQ9UJ70 344 aa8.1□□□□□ -1.11
PPP4R1-222ENST00000582594 CTXND1A0A1B0GTU2 59 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 GRIFINA4D1Z8 144 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 GJE1A6NN92 205 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 GGCTO75223 188 aaKnown RBP8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 RHBDL1O75783 438 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 KRASP01116 189 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 PDGFBP01127 241 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 UMODP07911 640 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 SLC25A6P12236 298 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 GCH1P30793 250 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 CCKARP32238 428 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 ARF1P84077 181 aaKnown RBP8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 ZXDAP98168 799 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 SRYQ05066 204 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 ZNF816Q0VGE8 651 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 SRSF7Q16629 238 aaKnown RBP eCLIP8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 C21orf62-AS1Q17RA5 79 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 FAM53AQ6NSI3 398 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 CADM4Q8NFZ8 388 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 LSM10Q969L4 123 aaKnown RBP8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 ANAPC16Q96DE5 110 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 TBX15Q96SF7 602 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 DERL1Q9BUN8 251 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 REPIN1Q9BWE0 567 aaKnown RBP8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 DLL3Q9NYJ7 618 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 ZNF503-AS2A6NEH8 195 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 TMEM250H0YL14 139 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 C1QTNF9P0C862 333 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 COX6A1P12074 109 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 BATFQ16520 125 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 TDRG1Q3Y452 100 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 KCNIP4Q6PIL6 250 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 CENPVQ7Z7K6 275 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 FGFRL1Q8N441 504 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 CISD2Q8N5K1 135 aaKnown RBP8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 NEIL1Q96FI4 390 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 MS4A10Q96PG2 267 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 TMEM204Q9BSN7 226 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 PRDM14Q9GZV8 571 aa8.09□□□□□ -1.11
PPP4R1-222ENST00000582594 A0A1B0GWJ7 208 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms