RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 CLEC7AQ9BXN2 247 aa9.05□□□□□ -0.96
CDK5RAP3-204ENST00000577664 C11orf54Q9H0W9 315 aaPredicted RBP9.05□□□□□ -0.96
CDK5RAP3-204ENST00000577664 EHFQ9NZC4 300 aa9.05□□□□□ -0.96
CDK5RAP3-204ENST00000577664 OR1A1Q9P1Q5 309 aa9.05□□□□□ -0.96
CDK5RAP3-204ENST00000577664 TBC1D24Q9ULP9 559 aa9.05□□□□□ -0.96
CDK5RAP3-204ENST00000577664 CENPXA8MT69 81 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 DISC1C4P0D8 188 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 M0QYG6 137 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 HSPA12AO43301 675 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 TCF21O43680 179 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 IFNA6P05013 189 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 SLC6A1P30531 599 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 BTCP35070 178 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 PPP1CCP36873 323 aaKnown RBP9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 GNMTQ14749 295 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 SURF2Q15527 256 aaPredicted RBP9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 MINOS1Q5TGZ0 78 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 ZNF57Q68EA5 555 aaPredicted RBP9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 FAM71F2Q6NXP2 309 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 LPCAT3Q6P1A2 487 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 FAHD2BQ6P2I3 314 aaPredicted RBP9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 C9orf139Q6ZV77 190 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 LDLRAD3Q86YD5 345 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 ODF3L1Q8IXM7 274 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 C3orf56Q8N813 242 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 ZBTB34Q8NCN2 500 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 DUSP18Q8NEJ0 188 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 MRGPRFQ96AM1 343 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 FAHD2AQ96GK7 314 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 SLC25A21Q9BQT8 299 aaPredicted RBP9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 GINS4Q9BRT9 223 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 ABCB10Q9NRK6 738 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 GNG12Q9UBI6 72 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 ZNF69Q9UC07 566 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 SCP2D1Q9UJQ7 156 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 MINOS1-NBL1R4GNA1 71 aa9.04□□□□□ -0.96
CDK5RAP3-204ENST00000577664 OR5H14A6NHG9 310 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 BUB1B-PAK6H3BSN5 160 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 RAB29O14966 203 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 LYRM1O43325 122 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 PROP1O75360 226 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 IGLV2-14P01704 120 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 AADACP22760 399 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 NFYAP23511 347 aaPredicted RBP9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 NFYBP25208 207 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 INPP1P49441 399 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 LUMP51884 338 aaPredicted RBP9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 TSPAN5P62079 268 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 DCTN2Q13561 401 aaKnown RBP9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 HLA-DRB5Q30154 266 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 PLA1AQ53H76 456 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 KLF17Q5JT82 389 aaPredicted RBP9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 FAM53AQ6NSI3 398 aaPredicted RBP9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 OR2AK2Q8NG84 335 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 OR10V1Q8NGI7 309 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 OR51S1Q8NGJ8 323 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 OR4P4Q8NGL7 312 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 OR13C8Q8NGS7 320 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 OR56B4Q8NH76 319 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 UBALD1Q8TB05 177 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 ZNF486Q96H40 463 aaPredicted RBP9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 AJUBAQ96IF1 538 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 AKR1E2Q96JD6 320 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 ZNF251Q9BRH9 671 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 ZNF2Q9BSG1 426 aaPredicted RBP9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 PCGF1Q9BSM1 259 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 SUCNR1Q9BXA5 334 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 MMP28Q9H239 520 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 SIRT7Q9NRC8 400 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 PIPOXQ9P0Z9 390 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 KCNS2Q9ULS6 477 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 GPR132Q9UNW8 380 aa9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 TBL2Q9Y4P3 447 aaKnown RBP9.03□□□□□ -0.96
CDK5RAP3-204ENST00000577664 IGHV3-43A0A0B4J1X8 118 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 IGHV1-69DA0A0B4J2H0 117 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 OOSP1A8MZH6 123 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 IGHV1-69P01742 117 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 AMY2AP04746 511 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 IGHV3-43DP0DP04 118 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 ZNF16P17020 682 aaPredicted RBP9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 GNRHRP30968 328 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 EIF4EBP1Q13541 118 aaPredicted RBP9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 C16orf87Q6PH81 154 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 ZNF782Q6ZMW2 699 aaPredicted RBP9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 PNKDQ8N490 385 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 BVESQ8NE79 360 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 NANPQ8TBE9 248 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 MALSU1Q96EH3 234 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 SCGB3A2Q96PL1 93 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 ABHD14AQ9BUJ0 271 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 RSRP1Q9BUV0 290 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 PARP12Q9H0J9 701 aaKnown RBP9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 MEGF9Q9H1U4 602 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 IFI27L2Q9H2X8 130 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 PRDM13Q9H4Q3 707 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 COPZ2Q9P299 210 aa9.02□□□□□ -0.97
CDK5RAP3-204ENST00000577664 CMYA5Q8N3K9 4069 aa9.01□□□□□ -0.97
CDK5RAP3-204ENST00000577664 IGKV1D-13A0A0B4J2D9 117 aa9.01□□□□□ -0.97
CDK5RAP3-204ENST00000577664 TMEM89A2RUT3 159 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms