RNA–Protein interactions for RNA: ENST00000574933.1

CCDC40-213, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 326 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-213ENST00000574933 PIPOXQ9P0Z9 390 aa14.69□□□□□ -0.06
CCDC40-213ENST00000574933 A0A0A6YYJ9 748 aa14.68□□□□□ -0.06
CCDC40-213ENST00000574933 ZNF736B4DX44 427 aaPredicted RBP14.68□□□□□ -0.06
CCDC40-213ENST00000574933 ST8SIA5O15466 376 aa14.68□□□□□ -0.06
CCDC40-213ENST00000574933 LANCL1O43813 399 aa14.68□□□□□ -0.06
CCDC40-213ENST00000574933 CSF1P09603 554 aa14.68□□□□□ -0.06
CCDC40-213ENST00000574933 OR3A3P47888 321 aa14.68□□□□□ -0.06
CCDC40-213ENST00000574933 RFX2P48378 723 aa14.68□□□□□ -0.06
CCDC40-213ENST00000574933 TAS2R19P59542 299 aa14.68□□□□□ -0.06
CCDC40-213ENST00000574933 SSX2Q16385 188 aa14.68□□□□□ -0.06
CCDC40-213ENST00000574933 CCDC144NLQ6NUI1 221 aa14.68□□□□□ -0.06
CCDC40-213ENST00000574933 LYG1Q8N1E2 194 aa14.68□□□□□ -0.06
CCDC40-213ENST00000574933 Q8N402 240 aa14.68□□□□□ -0.06
CCDC40-213ENST00000574933 SIGLECL1Q8N7X8 197 aa14.68□□□□□ -0.06
CCDC40-213ENST00000574933 S100ZQ8WXG8 99 aa14.68□□□□□ -0.06
CCDC40-213ENST00000574933 RPEQ96AT9 228 aa14.68□□□□□ -0.06
CCDC40-213ENST00000574933 SDHCQ99643 169 aaPredicted RBP14.68□□□□□ -0.06
CCDC40-213ENST00000574933 ZNF251Q9BRH9 671 aa14.68□□□□□ -0.06
CCDC40-213ENST00000574933 THAP7Q9BT49 309 aaPredicted RBP14.68□□□□□ -0.06
CCDC40-213ENST00000574933 EHFQ9NZC4 300 aa14.68□□□□□ -0.06
CCDC40-213ENST00000574933 MDFIC2A0A1B0GVS7 189 aa14.67□□□□□ -0.06
CCDC40-213ENST00000574933 ANKRD20A5PA0PJZ0 165 aa14.67□□□□□ -0.06
CCDC40-213ENST00000574933 RAB29O14966 203 aa14.67□□□□□ -0.06
CCDC40-213ENST00000574933 TXNL1O43396 289 aa14.67□□□□□ -0.06
CCDC40-213ENST00000574933 PMP2P02689 132 aa14.67□□□□□ -0.06
CCDC40-213ENST00000574933 NFYAP23511 347 aaPredicted RBP14.67□□□□□ -0.06
CCDC40-213ENST00000574933 ZNF833PQ6ZTB9 187 aa14.67□□□□□ -0.06
CCDC40-213ENST00000574933 OR8H3Q8N146 312 aa14.67□□□□□ -0.06
CCDC40-213ENST00000574933 TMEM86BQ8N661 226 aa14.67□□□□□ -0.06
CCDC40-213ENST00000574933 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.67□□□□□ -0.06
CCDC40-213ENST00000574933 ZNF418Q8TF45 676 aaPredicted RBP14.67□□□□□ -0.06
CCDC40-213ENST00000574933 HILPDAQ9Y5L2 63 aa14.67□□□□□ -0.06
CCDC40-213ENST00000574933 SAA2-SAA4A0A096LPE2 208 aa14.66□□□□□ -0.06
CCDC40-213ENST00000574933 A0A1W2PPI3 338 aa14.66□□□□□ -0.06
CCDC40-213ENST00000574933 HSD17B6O14756 317 aa14.66□□□□□ -0.06
CCDC40-213ENST00000574933 CD3DP04234 171 aa14.66□□□□□ -0.06
CCDC40-213ENST00000574933 GAPDHP04406 335 aaKnown RBP14.66□□□□□ -0.06
CCDC40-213ENST00000574933 SAA2P0DJI9 122 aaPredicted RBP14.66□□□□□ -0.06
CCDC40-213ENST00000574933 FCGR2CP31995 323 aa14.66□□□□□ -0.06
CCDC40-213ENST00000574933 IER3P46695 156 aa14.66□□□□□ -0.06
CCDC40-213ENST00000574933 HILS1P60008 231 aa14.66□□□□□ -0.06
CCDC40-213ENST00000574933 DIAPH2-AS1Q14236 149 aa14.66□□□□□ -0.06
CCDC40-213ENST00000574933 HABP2Q14520 560 aaPredicted RBP14.66□□□□□ -0.06
CCDC40-213ENST00000574933 RTN4IP1Q8WWV3 396 aaPredicted RBP14.66□□□□□ -0.06
CCDC40-213ENST00000574933 DEDD2Q8WXF8 326 aa14.66□□□□□ -0.06
CCDC40-213ENST00000574933 TOMM40LQ969M1 308 aa14.66□□□□□ -0.06
CCDC40-213ENST00000574933 NF1P21359 2839 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 IGKV1D-13A0A0B4J2D9 117 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 CLDN34H7C241 214 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 PROP1O75360 226 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 SLC22A5O76082 557 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 PPYP01298 95 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 OR8U9P0C7N5 309 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 IGKV1-13P0DP09 117 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 AADACP22760 399 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 LUMP51884 338 aaPredicted RBP14.65□□□□□ -0.06
CCDC40-213ENST00000574933 MSMO1Q15800 293 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 LRRC75BQ2VPJ9 315 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 RNASE10Q5GAN6 216 aaKnown RBP14.65□□□□□ -0.06
CCDC40-213ENST00000574933 STEAP1BQ6NZ63 245 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 RBMS3Q6XE24 437 aaKnown RBP14.65□□□□□ -0.06
CCDC40-213ENST00000574933 ARRDC1Q8N5I2 433 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 OR8U1Q8NH10 309 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 SSMEM1Q8WWF3 244 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 ZDHHC16Q969W1 377 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 ABHD14BQ96IU4 210 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 S1PR3Q99500 378 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 OCEL1Q9H607 264 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 ZNF221Q9UK13 617 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 POMT1Q9Y6A1 747 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 ZFHX3Q15911 3703 aa14.65□□□□□ -0.06
CCDC40-213ENST00000574933 IGHV1-3A0A0C4DH29 117 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 FAM90A9PA6NNJ1 464 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 RAB3DO95716 219 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 AKAIN1P0CW23 69 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 ARHGDIBP52566 201 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 KLF9Q13886 244 aaPredicted RBP14.64□□□□□ -0.07
CCDC40-213ENST00000574933 MEF2DQ14814 521 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 TGIF2LXQ8IUE1 241 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 OR6F1Q8NGZ6 308 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 OR5R1Q8NH85 324 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 PIFOQ8TCI5 191 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 CFHR4Q92496 578 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 MOB3AQ96BX8 217 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 JMJD8Q96S16 334 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 SSX3Q99909 188 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 TINAGL1Q9GZM7 467 aaPredicted RBP14.64□□□□□ -0.07
CCDC40-213ENST00000574933 OR2D2Q9H210 308 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 DPAGT1Q9H3H5 408 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 RNF150Q9ULK6 438 aa14.64□□□□□ -0.07
CCDC40-213ENST00000574933 M0QYG6 137 aa14.63□□□□□ -0.07
CCDC40-213ENST00000574933 IFNA2P01563 188 aa14.63□□□□□ -0.07
CCDC40-213ENST00000574933 ZNF735P0CB33 412 aa14.63□□□□□ -0.07
CCDC40-213ENST00000574933 PAX6P26367 422 aa14.63□□□□□ -0.07
CCDC40-213ENST00000574933 CD40LGP29965 261 aa14.63□□□□□ -0.07
CCDC40-213ENST00000574933 BRS3P32247 399 aa14.63□□□□□ -0.07
CCDC40-213ENST00000574933 GPR12P47775 334 aa14.63□□□□□ -0.07
CCDC40-213ENST00000574933 BAK1Q16611 211 aa14.63□□□□□ -0.07
CCDC40-213ENST00000574933 LHFPL1Q86WI0 220 aa14.63□□□□□ -0.07
CCDC40-213ENST00000574933 THNSL2Q86YJ6 484 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms