RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 JMJD6Q6NYC1 403 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 C1orf122Q6ZSJ8 110 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 SPSB1Q96BD6 273 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 GALNT14Q96FL9 552 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 VSTM2LQ96N03 204 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 COL25A1Q9BXS0 654 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 TCRBV16S1A1N1A0A5B0 115 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 AWAT1Q58HT5 328 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 CCL13Q99616 98 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 TMEM106BQ9NUM4 274 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 SIGLEC1Q9BZZ2 1709 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 GPX5O75715 221 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 PWWP2BQ6NUJ5 590 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 FAM159AQ6UWV7 190 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 KIR3DL3Q8N743 410 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 LOC390937A0A1W2PQ73 354 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 CEACAM18A8MTB9 384 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 TRDCB7Z8K6 153 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 PRB4P10163 310 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 NAT1P18440 290 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 GABRG2P18507 467 aa13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 EPHA8P29322 1005 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-202ENST00000573710 HIST1H1AQ02539 215 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 CXorf66Q5JRM2 361 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 RAB24Q969Q5 203 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 ATRXP46100 2492 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 CLDN14O95500 239 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 PIGYQ3MUY2 71 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 SLC25A42Q86VD7 318 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 OR4D11Q8NGI4 311 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 YIPF6Q96EC8 236 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 INS-IGF2F8WCM5 200 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 M0QZK8 103 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 GGCTO75223 188 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 CEACAM4O75871 244 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 INSP01308 110 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 CTSSP25774 331 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 RAC3P60763 192 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 KIAA1644Q3SXP7 199 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 WDR38Q5JTN6 314 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 CCDC144NLQ6NUI1 221 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 ZFP64Q9NPA5 681 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 OPN4Q9UHM6 478 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 AMY1AP04745 511 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 HIST1H1DP16402 221 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 PRSS41Q7RTY9 318 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 TNFSF14O43557 240 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 SFTPCP11686 197 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 IL9P15248 144 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 GPX2P18283 190 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 C3orf36Q3SXR2 165 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 AFMIDQ63HM1 303 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 PARLQ9H300 379 aa13.88□□□□□ -0.19
CACNA1A-202ENST00000573710 CELA2BP08218 269 aaPredicted RBP13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 SMIM13P0DJ93 91 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 FAM106AQ4KMX7 169 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 YAE1D1Q9NRH1 226 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 SF3B6Q9Y3B4 125 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 MRPS18BQ9Y676 258 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 OTOSQ8NHW6 89 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 ZNF625Q96I27 306 aaPredicted RBP13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 LINC01587Q99440 93 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 KIR2DL4Q99706 377 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 CTSVO60911 334 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 ISL1P61371 349 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 FAM53BQ14153 422 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 LDLRAD1Q5T700 205 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 DOCK5Q9H7D0 1870 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 FOXI3A8MTJ6 420 aaPredicted RBP13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 PGA4P0DJD7 388 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 PGA5P0DJD9 388 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 ATP5G2Q06055 141 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 ZNF562Q6V9R5 426 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 MS4A5Q9H3V2 200 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 RNASE4P34096 147 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 RIPPLY3P57055 190 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 SNRPD3P62318 126 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 GATD1Q8NB37 220 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 OR8D4Q8NGM9 314 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 SRSF12Q8WXF0 261 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 ST6GALNAC6Q969X2 333 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 AKIP1Q9NQ31 210 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 WIPI2Q9Y4P8 454 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 TDRD15B5MCY1 1934 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 CRPP02741 224 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 ISG15P05161 165 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 ST3GAL2Q16842 350 aa13.87□□□□□ -0.19
CACNA1A-202ENST00000573710 CLPPQ16740 277 aaPredicted RBP13.86□□□□□ -0.19
CACNA1A-202ENST00000573710 MVB12AQ96EY5 273 aa13.86□□□□□ -0.19
CACNA1A-202ENST00000573710 HSPB2A8KAH6 182 aa13.86□□□□□ -0.19
CACNA1A-202ENST00000573710 HSPB2Q16082 182 aa13.86□□□□□ -0.19
CACNA1A-202ENST00000573710 TMEM196Q5HYL7 178 aa13.86□□□□□ -0.19
CACNA1A-202ENST00000573710 GAPTQ8N292 157 aa13.86□□□□□ -0.19
CACNA1A-202ENST00000573710 OPN3Q9H1Y3 402 aaPredicted RBP13.86□□□□□ -0.19
CACNA1A-202ENST00000573710 LINC01387J3KSC0 135 aa13.86□□□□□ -0.19
CACNA1A-202ENST00000573710 PAX2Q02962 417 aa13.86□□□□□ -0.19
CACNA1A-202ENST00000573710 FAM209BQ5JX69 171 aa13.86□□□□□ -0.19
CACNA1A-202ENST00000573710 TEPPQ6URK8 271 aa13.86□□□□□ -0.19
CACNA1A-202ENST00000573710 LHX9Q9NQ69 397 aa13.86□□□□□ -0.19
CACNA1A-202ENST00000573710 PPIAL4EA0A075B759 164 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms