RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 IGHV3-43A0A0B4J1X8 118 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 CENPXA8MT69 81 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 NDUFA7O95182 113 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 IGHV1-8P0DP01 117 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 IGHV3-43DP0DP04 118 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 ZBTB25P24278 435 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 FCGR2CP31995 323 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 PPP1CCP36873 323 aaKnown RBP11.16□□□□□ -0.62
RPAIN-209ENST00000571558 DEFA1P59665 94 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 DEFA3P59666 94 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 BPIFB3P59826 476 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 PAX8Q06710 450 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 LY6G6FQ5SQ64 297 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 LDLRAD3Q86YD5 345 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 POC5Q8NA72 575 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 PARP12Q9H0J9 701 aaKnown RBP11.16□□□□□ -0.62
RPAIN-209ENST00000571558 SIRPDQ9H106 197 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 MCUBQ9NWR8 336 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 ONECUT1Q9UBC0 465 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 KPTNQ9Y664 436 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 ARHGAP32A7KAX9 2087 aa11.16□□□□□ -0.62
RPAIN-209ENST00000571558 A0A087X0M5 115 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 A0A1B0GX30 115 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 CLPSL1A2RUU4 121 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 DISC1C4P0D8 188 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 IFNA6P05013 189 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 MMP9P14780 707 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 AADACP22760 399 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 NFYAP23511 347 aaPredicted RBP11.15□□□□□ -0.62
RPAIN-209ENST00000571558 CCR6P51684 374 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 RAG2P55895 527 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 ARF6P62330 175 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 LTC4SQ16873 150 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 MORN2Q502X0 79 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 PLA1AQ53H76 456 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 MZT2BQ6NZ67 158 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 ZNF439Q8NDP4 499 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 OR13C8Q8NGS7 320 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 OR6F1Q8NGZ6 308 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 TERB2Q8NHR7 220 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 UPRTQ96BW1 309 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 PRRT1Q99946 306 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 GINS4Q9BRT9 223 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 ZNF2Q9BSG1 426 aaPredicted RBP11.15□□□□□ -0.62
RPAIN-209ENST00000571558 RDH8Q9NYR8 311 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 SESN1Q9Y6P5 492 aa11.15□□□□□ -0.62
RPAIN-209ENST00000571558 FAM181BA6NEQ2 426 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 OR5H14A6NHG9 310 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 HSPA12AO43301 675 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 YPEL1O60688 119 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 PPYP01298 95 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 CEACAM6P40199 344 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 TSPAN5P62079 268 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 ZNF782Q6ZMW2 699 aaPredicted RBP11.14□□□□□ -0.63
RPAIN-209ENST00000571558 IDO2Q6ZQW0 420 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 NRARPQ7Z6K4 114 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 TMEM17Q86X19 198 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 TMEM86BQ8N661 226 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 OR10V1Q8NGI7 309 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 MOB3AQ96BX8 217 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 YPEL2Q96QA6 119 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 FXYD6Q9H0Q3 95 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 TMEM133Q9H2Q1 129 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 GNG12Q9UBI6 72 aa11.14□□□□□ -0.63
RPAIN-209ENST00000571558 IGKV1D-13A0A0B4J2D9 117 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 ITGB1BP1O14713 200 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 HOXA3O43365 443 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-209ENST00000571558 PTTG1O95997 202 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 IGKV1-13P0DP09 117 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 NFYBP25208 207 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 CD34P28906 385 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 ZNF134P52741 427 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 DLX1P56177 255 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 SRSF4Q08170 494 aaKnown RBP11.13□□□□□ -0.63
RPAIN-209ENST00000571558 RGS21Q2M5E4 152 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 Q3ZCU0 254 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 BTNL3Q6UXE8 466 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 C8orf31Q8N9H6 132 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 DUSP18Q8NEJ0 188 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 ZNF596Q8TC21 504 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 TNFRSF14Q92956 283 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 LEAP2Q969E1 77 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 AGMATQ9BSE5 352 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 METTL8Q9H825 291 aaKnown RBP11.13□□□□□ -0.63
RPAIN-209ENST00000571558 SCP2D1Q9UJQ7 156 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 PSG11Q9UQ72 335 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 OR2W1Q9Y3N9 320 aa11.13□□□□□ -0.63
RPAIN-209ENST00000571558 hCG_1809904A0A1W2PP81 198 aa11.12□□□□□ -0.63
RPAIN-209ENST00000571558 A0A1W2PPE2 198 aa11.12□□□□□ -0.63
RPAIN-209ENST00000571558 A0A1W2PR64 198 aa11.12□□□□□ -0.63
RPAIN-209ENST00000571558 A0A1W2PRV1 198 aa11.12□□□□□ -0.63
RPAIN-209ENST00000571558 FAM172BPA6NC97 362 aa11.12□□□□□ -0.63
RPAIN-209ENST00000571558 NDUFB6O95139 128 aa11.12□□□□□ -0.63
RPAIN-209ENST00000571558 IGHV4-38-2P0DP08 117 aa11.12□□□□□ -0.63
RPAIN-209ENST00000571558 SPNP16150 400 aa11.12□□□□□ -0.63
RPAIN-209ENST00000571558 UCP3P55916 312 aa11.12□□□□□ -0.63
RPAIN-209ENST00000571558 SCGB2B2Q4G0G5 96 aa11.12□□□□□ -0.63
RPAIN-209ENST00000571558 CT45A1Q5HYN5 189 aa11.12□□□□□ -0.63
RPAIN-209ENST00000571558 HCP5Q6MZN7 132 aa11.12□□□□□ -0.63
RPAIN-209ENST00000571558 CT45A3Q8NHU0 189 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms