RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 CRYBA1P05813 215 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 CD5P06127 495 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 SEC11BP0C7V7 166 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 VDAC1P21796 283 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 F2RP25116 425 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 SRPXP78539 464 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 PSG7Q13046 419 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 PRAMEF6Q5VXH4 476 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 SAXO1Q8IYX7 474 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 RFESDQ8TAC1 157 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 TMEM56Q96MV1 263 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 PLEKHF2Q9H8W4 249 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 RNF122Q9H9V4 155 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 TMEM56-RWDD3S4R434 201 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 FAM90A10PA6NDY2 464 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 FAM90A18PA6NE21 464 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 FAM90A16PA6NEW6 464 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 FAM90A20PA6NIJ5 464 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 FAM90A8PA6NJQ4 464 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 FAM90A7PA6NKC0 464 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 FAM90A22PA8MWA6 464 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 FAM90A12PA8MX19 464 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 FAM90A5PA8MXJ8 464 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 FAM90A23PA8MXZ1 464 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 IGHV3-13P01766 116 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 IGHV3-7P01780 117 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 ARG1P05089 322 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 FAM90A15PP0C7V4 464 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 FAM90A13PP0C7W8 464 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 FAM90A14PP0C7W9 464 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 FAM90A24PP0C7X0 464 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 ZNF806P0C7X5 589 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 NQO2P16083 231 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 PMELP40967 661 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 TLE1Q04724 770 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 AESQ08117 197 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 FOXF2Q12947 444 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 DEFB109BQ30KR1 87 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 Q6ZRM9 215 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 OR10V1Q8NGI7 309 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 CACNG8Q8WXS5 425 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 CITED1Q99966 193 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 GINS3Q9BRX5 216 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 PLK3Q9H4B4 646 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 CACNG5Q9UF02 275 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 IGHV3-43A0A0B4J1X8 118 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 DEFB108AA8MXU0 73 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 UMAD1C9J7I0 102 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 SS18L1O75177 396 aaPredicted RBP7.41□□□□□ -1.22
LINC00558-201ENST00000569422 IGHV3-43DP0DP04 118 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 PLA2G5P39877 138 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 UCP2P55851 309 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 ZNF324BQ6AW86 544 aaPredicted RBP7.41□□□□□ -1.22
LINC00558-201ENST00000569422 SFT2D1Q8WV19 159 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 C2orf88Q9BSF0 95 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 KCNJ16Q9NPI9 418 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 GTF3C1Q12789 2109 aa7.4□□□□□ -1.22
LINC00558-201ENST00000569422 GALR2O43603 387 aaPredicted RBP7.4□□□□□ -1.22
LINC00558-201ENST00000569422 PSPNO60542 156 aa7.4□□□□□ -1.22
LINC00558-201ENST00000569422 METTL15P1P0C7V9 234 aa7.4□□□□□ -1.22
LINC00558-201ENST00000569422 STAG3L2P0CL84 134 aa7.4□□□□□ -1.22
LINC00558-201ENST00000569422 ZNF14P17017 642 aaPredicted RBP7.4□□□□□ -1.22
LINC00558-201ENST00000569422 UCP1P25874 307 aa7.4□□□□□ -1.22
LINC00558-201ENST00000569422 GCH1P30793 250 aa7.4□□□□□ -1.22
LINC00558-201ENST00000569422 MC5RP33032 325 aa7.4□□□□□ -1.22
LINC00558-201ENST00000569422 OR3A1P47881 315 aa7.4□□□□□ -1.22
LINC00558-201ENST00000569422 LINC00205P59089 165 aa7.4□□□□□ -1.22
LINC00558-201ENST00000569422 ZNF266Q14584 549 aa7.4□□□□□ -1.22
LINC00558-201ENST00000569422 AWAT1Q58HT5 328 aa7.4□□□□□ -1.22
LINC00558-201ENST00000569422 KLF14Q8TD94 323 aaPredicted RBP7.4□□□□□ -1.22
LINC00558-201ENST00000569422 GMPPAQ96IJ6 420 aaPredicted RBP7.4□□□□□ -1.22
LINC00558-201ENST00000569422 CHODLQ9H9P2 273 aa7.4□□□□□ -1.22
LINC00558-201ENST00000569422 TAAR3PQ9P1P4 343 aa7.4□□□□□ -1.22
LINC00558-201ENST00000569422 NAGKQ9UJ70 344 aa7.4□□□□□ -1.22
LINC00558-201ENST00000569422 OTOGLQ3ZCN5 2332 aa7.4□□□□□ -1.22
LINC00558-201ENST00000569422 CADP27708 2225 aa7.4□□□□□ -1.23
LINC00558-201ENST00000569422 TIMM8AO60220 97 aaPredicted RBP7.4□□□□□ -1.23
LINC00558-201ENST00000569422 FTH1P19P0C7X4 201 aa7.4□□□□□ -1.23
LINC00558-201ENST00000569422 LINC00614P0C842 121 aa7.4□□□□□ -1.23
LINC00558-201ENST00000569422 GABRA2P47869 451 aa7.4□□□□□ -1.23
LINC00558-201ENST00000569422 NMSQ5H8A3 153 aa7.4□□□□□ -1.23
LINC00558-201ENST00000569422 C10orf91Q5T1B1 145 aa7.4□□□□□ -1.23
LINC00558-201ENST00000569422 DHRS7BQ6IAN0 325 aaPredicted RBP7.4□□□□□ -1.23
LINC00558-201ENST00000569422 Q6P435 159 aa7.4□□□□□ -1.23
LINC00558-201ENST00000569422 BTNL3Q6UXE8 466 aa7.4□□□□□ -1.23
LINC00558-201ENST00000569422 FAM214BQ7L5A3 538 aa7.4□□□□□ -1.23
LINC00558-201ENST00000569422 SMIM15Q7Z3B0 74 aa7.4□□□□□ -1.23
LINC00558-201ENST00000569422 OR1L1Q8NH94 360 aa7.4□□□□□ -1.23
LINC00558-201ENST00000569422 LOXL4Q96JB6 756 aa7.4□□□□□ -1.23
LINC00558-201ENST00000569422 SLC25A31Q9H0C2 315 aa7.4□□□□□ -1.23
LINC00558-201ENST00000569422 LYRM2Q9NU23 88 aaPredicted RBP7.4□□□□□ -1.23
LINC00558-201ENST00000569422 DUSP13Q9UII6 198 aa7.4□□□□□ -1.23
LINC00558-201ENST00000569422 RBMXL2O75526 392 aaKnown RBP7.39□□□□□ -1.23
LINC00558-201ENST00000569422 KRASP01116 189 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 ZNF816Q0VGE8 651 aaPredicted RBP7.39□□□□□ -1.23
LINC00558-201ENST00000569422 EDDM3AQ14507 147 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 SPINK9Q5DT21 86 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 SPANXN5Q5MJ07 72 aa7.39□□□□□ -1.23
LINC00558-201ENST00000569422 H1FOOQ8IZA3 346 aaPredicted RBP7.39□□□□□ -1.23
LINC00558-201ENST00000569422 C9orf106Q8NAJ2 232 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms