RNA–Protein interactions for RNA: ENST00000568494.1

ZNRF1-208, Transcript of zinc and ring finger 1, human

TSL 2

Gene ZNRF1, Length 2,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNRF1-208	ENST00000568494		F8W036	122 aa		11.09	□□□□□ -0.63
ZNRF1-208	ENST00000568494	SSSCA1	O60232	199 aa		11.09	□□□□□ -0.63
ZNRF1-208	ENST00000568494	FBXO24	O75426	580 aa		11.09	□□□□□ -0.63
ZNRF1-208	ENST00000568494	IGHV3-43D	P0DP04	118 aa		11.09	□□□□□ -0.63
ZNRF1-208	ENST00000568494	PPP1CC	P36873	323 aa	Known RBP	11.09	□□□□□ -0.63
ZNRF1-208	ENST00000568494	BLOC1S1	P78537	153 aa		11.09	□□□□□ -0.63
ZNRF1-208	ENST00000568494	SRSF3	P84103	164 aa	Known RBP	11.09	□□□□□ -0.63
ZNRF1-208	ENST00000568494	GUCA2B	Q16661	112 aa		11.09	□□□□□ -0.63
ZNRF1-208	ENST00000568494	IZUMO4	Q1ZYL8	232 aa		11.09	□□□□□ -0.63
ZNRF1-208	ENST00000568494	TMEM108	Q6UXF1	575 aa		11.09	□□□□□ -0.63
ZNRF1-208	ENST00000568494	ZNF843	Q8N446	348 aa		11.09	□□□□□ -0.63
ZNRF1-208	ENST00000568494	SMIM8	Q96KF7	97 aa		11.09	□□□□□ -0.63
ZNRF1-208	ENST00000568494	SNX22	Q96L94	193 aa		11.09	□□□□□ -0.63
ZNRF1-208	ENST00000568494	TOLLIP	Q9H0E2	274 aa		11.09	□□□□□ -0.63
ZNRF1-208	ENST00000568494	TREM1	Q9NP99	234 aa		11.09	□□□□□ -0.63
ZNRF1-208	ENST00000568494	KIAA2026	Q5HYC2	2103 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	C15orf65	H3BRN8	121 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	PITX3	O75364	302 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	PTAFR	P25105	342 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	CD80	P33681	288 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	GATA4	P43694	442 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	ASCL1	P50553	236 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	TNFAIP6	P98066	277 aa	Predicted RBP	11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	RBPJ	Q06330	500 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494		Q6ZRM9	215 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	OR2C3	Q8N628	320 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	ZNF645	Q8N7E2	425 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	ABHD14B	Q96IU4	210 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	OR2D2	Q9H210	308 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	PLEKHF2	Q9H8W4	249 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	SEBOX	Q9HB31	216 aa	Predicted RBP	11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	IGSF23	A1L1A6	192 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	TMEM50A	O95807	157 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	PVALB	P20472	110 aa	Predicted RBP	11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	VAMP2	P63027	116 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	PAX5	Q02548	391 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	UBAC2	Q8NBM4	344 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	NINJ1	Q92982	152 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	ARV1	Q9H2C2	271 aa		11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	LIN7C	Q9NUP9	197 aa	Known RBP	11.08	□□□□□ -0.64
ZNRF1-208	ENST00000568494	COL12A1	Q99715	3063 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494		A0A1B0GU03	582 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	DEFB108A	A8MXU0	73 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	MGST3	O14880	152 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	CHST1	O43916	411 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	IGKV1-5	P01602	117 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	H2AFB1	P0C5Y9	115 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	CAV2	P51636	162 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	FLI1	Q01543	452 aa	Predicted RBP	11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	BSPH1	Q075Z2	132 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	LTC4S	Q16873	150 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	ZBTB34	Q8NCN2	500 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	ZNRF1	Q8ND25	227 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	RNASE11	Q8TAA1	199 aa	Known RBP	11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	RND1	Q92730	232 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	LSM10	Q969L4	123 aa	Known RBP	11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	SEC11C	Q9BY50	192 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	HRH4	Q9H3N8	390 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	GCM1	Q9NP62	436 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	UQCC1	Q9NVA1	299 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	RNF7	Q9UBF6	113 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	NDRG3	Q9UGV2	375 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	IL19	Q9UHD0	177 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	HIVEP3	Q5T1R4	2406 aa		11.07	□□□□□ -0.64
ZNRF1-208	ENST00000568494	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	ODAM	A1E959	279 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	MED6	O75586	246 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	CYB5R3	P00387	301 aa	Predicted RBP	11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	SLC25A6	P12236	298 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	LPAR6	P43657	344 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	SULT1A2	P50226	295 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	RPL30	P62888	115 aa	Known RBP	11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	TLE1	Q04724	770 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	ODF3L1	Q8IXM7	274 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	SPAG16	Q8N0X2	631 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	TMEM252	Q8N6L7	170 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	PPP1R35	Q8TAP8	253 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	TMEM231	Q9H6L2	316 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	LYRM2	Q9NU23	88 aa	Predicted RBP	11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	PIGBOS1	A0A0B4J2F0	54 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	RNF212B	A8MTL3	300 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494		K7N7A8	449 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	SPINT2	O43291	252 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	SNAPIN	O95295	136 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	PAX9	P55771	341 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	TRAT1	Q6PIZ9	186 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	FAM222B	Q8WU58	562 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	WFIKKN1	Q96NZ8	548 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	GINS3	Q9BRX5	216 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	CACNG5	Q9UF02	275 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	RNF115	Q9Y4L5	304 aa		11.06	□□□□□ -0.64
ZNRF1-208	ENST00000568494	TRGV8	A0A0C4DH27	118 aa		11.05	□□□□□ -0.64
ZNRF1-208	ENST00000568494	WRB	O00258	174 aa		11.05	□□□□□ -0.64
ZNRF1-208	ENST00000568494	ST8SIA5	O15466	376 aa		11.05	□□□□□ -0.64
ZNRF1-208	ENST00000568494	OR4A8	P0C604	315 aa		11.05	□□□□□ -0.64
ZNRF1-208	ENST00000568494	SELL	P14151	372 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms