RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 SLC25A38Q96DW6 304 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 CMSS1Q9BQ75 279 aaKnown RBP10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 HDHD3Q9BSH5 251 aaPredicted RBP10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 C12orf4Q9NQ89 552 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 RHBDL2Q9NX52 303 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 ABRACLQ9P1F3 81 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 SPATA2Q9UM82 520 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 VWFP04275 2813 aa10.81□□□□□ -0.68
VPS9D1-204ENST00000565023 SCGNO76038 276 aa10.8□□□□□ -0.68
VPS9D1-204ENST00000565023 GNB3P16520 340 aa10.8□□□□□ -0.68
VPS9D1-204ENST00000565023 HTD2P86397 168 aa10.8□□□□□ -0.68
VPS9D1-204ENST00000565023 ARL6IP1Q15041 203 aa10.8□□□□□ -0.68
VPS9D1-204ENST00000565023 MORN2Q502X0 79 aa10.8□□□□□ -0.68
VPS9D1-204ENST00000565023 OXLD1Q5BKU9 147 aa10.8□□□□□ -0.68
VPS9D1-204ENST00000565023 SLC35E3Q7Z769 313 aa10.8□□□□□ -0.68
VPS9D1-204ENST00000565023 OR2T10Q8NGZ9 312 aa10.8□□□□□ -0.68
VPS9D1-204ENST00000565023 ABHD14AQ9BUJ0 271 aa10.8□□□□□ -0.68
VPS9D1-204ENST00000565023 Q9N2K0 584 aa10.8□□□□□ -0.68
VPS9D1-204ENST00000565023 MGAT4AQ9UM21 535 aa10.8□□□□□ -0.68
VPS9D1-204ENST00000565023 LINC01548A6NM66 108 aa10.79□□□□□ -0.68
VPS9D1-204ENST00000565023 PF4P02776 101 aa10.79□□□□□ -0.68
VPS9D1-204ENST00000565023 CD3GP09693 182 aa10.79□□□□□ -0.68
VPS9D1-204ENST00000565023 RPL5P46777 297 aaKnown RBP10.79□□□□□ -0.68
VPS9D1-204ENST00000565023 IZUMO1Q8IYV9 350 aa10.79□□□□□ -0.68
VPS9D1-204ENST00000565023 ST6GALNAC6Q969X2 333 aa10.79□□□□□ -0.68
VPS9D1-204ENST00000565023 GALMQ96C23 342 aa10.79□□□□□ -0.68
VPS9D1-204ENST00000565023 KCTD12Q96CX2 325 aaKnown RBP10.79□□□□□ -0.68
VPS9D1-204ENST00000565023 JPT1Q9UK76 154 aa10.79□□□□□ -0.68
VPS9D1-204ENST00000565023 TSSC4Q9Y5U2 329 aaPredicted RBP10.79□□□□□ -0.68
VPS9D1-204ENST00000565023 A0A075B6Q4 140 aa10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 A0A0A6YYH2 397 aa10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 A6NJ64 397 aa10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 ST8SIA5O15466 376 aa10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 FGF16O43320 207 aa10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 MOSP00540 346 aa10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 CD33P20138 364 aa10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 CD1BP29016 333 aa10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 OR3A3P47888 321 aa10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 HLA-DRB3P79483 266 aa10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 MRPS15P82914 257 aaKnown RBP10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 EBI3Q14213 229 aa10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 CDNFQ49AH0 187 aa10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 LY6G6FQ5SQ64 297 aa10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 SAMD5Q5TGI4 173 aa10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 STEAP3Q658P3 488 aa10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 RASL11BQ9BPW5 248 aa10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 MRPL20Q9BYC9 149 aaKnown RBP10.78□□□□□ -0.68
VPS9D1-204ENST00000565023 NUDT19A8MXV4 375 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 TXNL1O43396 289 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 YPEL1O60688 119 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 RGS11O94810 467 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 FCGR3AP08637 254 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 GSTP1P09211 210 aaKnown RBP10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 LSAMPQ13449 338 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 ARFRP1Q13795 201 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 BEAN1Q3B7T3 259 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 ZNF260Q3ZCT1 412 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 HACD4Q5VWC8 232 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 C18orf65Q6ZTR6 163 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 CLVS1Q8IUQ0 354 aaPredicted RBP10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 FOXRED2Q8IWF2 684 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 Q8N6K4 173 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 Q8N9W7 124 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 OR2AK2Q8NG84 335 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 CHPT1Q8WUD6 406 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 YPEL2Q96QA6 119 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 BCL7BQ9BQE9 202 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 ABCG5Q9H222 651 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 DCSTAMPQ9H295 470 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 SCOCQ9UIL1 159 aa10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 ELF5Q9UKW6 265 aaPredicted RBP10.77□□□□□ -0.69
VPS9D1-204ENST00000565023 NOTCH3Q9UM47 2321 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 TRDCB7Z8K6 153 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 LANCL1O43813 399 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 IGHG2P01859 326 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 SCTP09683 121 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 IGLL1P15814 213 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 GPR12P47775 334 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 RORCP51449 518 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 ZNF137PP52743 207 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 TMBIM6P55061 237 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 F2RL1P55085 397 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 SLC35B1P78383 322 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 MMDQ15546 238 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 SRSF7Q16629 238 aaKnown RBP eCLIP10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 UBE2NLQ5JXB2 153 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 Q6ZS49 121 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 LCNL1Q6ZST4 164 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 ODF3L1Q8IXM7 274 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 STPG2Q8N412 459 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 RAB2BQ8WUD1 216 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 ACOT12Q8WYK0 555 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 S1PR3Q99500 378 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 PARP12Q9H0J9 701 aaKnown RBP10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 DIABLOQ9NR28 239 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 LIN7CQ9NUP9 197 aaKnown RBP10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 OR1A1Q9P1Q5 309 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 SLC23A1Q9UHI7 598 aa10.76□□□□□ -0.69
VPS9D1-204ENST00000565023 TRAV18A0A075B6X5 111 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms