RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 TP53TG3Q9ULZ0 132 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 DHDHQ9UQ10 334 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 CSDC2Q9Y534 153 aaKnown RBP5.39□□□□□ -1.55
PTPN9-204ENST00000564970 INSL5Q9Y5Q6 135 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 NUP205Q92621 2012 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 NUP214P35658 2090 aaPredicted RBP5.38□□□□□ -1.55
PTPN9-204ENST00000564970 A0A087WX48 190 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 SMIM28A0A1B0GU29 152 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 A0A1W2PP11 408 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 A0A1W2PS18 150 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 ZFP92A6NM28 416 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 C3orf80F5H4A9 247 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 NRG2O14511 850 aaPredicted RBP5.38□□□□□ -1.55
PTPN9-204ENST00000564970 PTGESO14684 152 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 ERI3O43414 337 aaKnown RBP5.38□□□□□ -1.55
PTPN9-204ENST00000564970 ANGPTL7O43827 346 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 NUPR1O60356 82 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 FCN3O75636 299 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 IFI6P09912 130 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 H2BFMP0C1H6 154 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 SLC25A6P12236 298 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 IL9P15248 144 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 TAL1P17542 331 aaPredicted RBP5.38□□□□□ -1.55
PTPN9-204ENST00000564970 SRD5A1P18405 259 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 CD33P20138 364 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 MDKP21741 143 aaPredicted RBP5.38□□□□□ -1.55
PTPN9-204ENST00000564970 KIR2DL1P43626 348 aaPredicted RBP5.38□□□□□ -1.55
PTPN9-204ENST00000564970 ATP5J2P56134 94 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 TMPRSS3P57727 454 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 SRSF1Q07955 248 aaKnown RBP eCLIP5.38□□□□□ -1.55
PTPN9-204ENST00000564970 OR4A5Q8NH83 315 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 FAM174AQ8TBP5 190 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 APOBEC3DQ96AK3 386 aaPredicted RBP5.38□□□□□ -1.55
PTPN9-204ENST00000564970 FAM131CQ96AQ9 280 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 OXGR1Q96P68 337 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 NXF5Q9H1B4 397 aaKnown RBP5.38□□□□□ -1.55
PTPN9-204ENST00000564970 WDR76Q9H967 626 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 DMRT3Q9NQL9 472 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 TAAR2Q9P1P5 351 aa5.38□□□□□ -1.55
PTPN9-204ENST00000564970 ERRFI1Q9UJM3 462 aaPredicted RBP5.38□□□□□ -1.55
PTPN9-204ENST00000564970 ZNF443Q9Y2A4 671 aaPredicted RBP5.38□□□□□ -1.55
PTPN9-204ENST00000564970 CENPFP49454 3210 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 MBLAC1A4D2B0 266 aaPredicted RBP5.37□□□□□ -1.55
PTPN9-204ENST00000564970 SMIM9A6NGZ8 99 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 CPSF4LA6NMK7 179 aaKnown RBP5.37□□□□□ -1.55
PTPN9-204ENST00000564970 ANKRD66B4E2M5 251 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 B5MCH6 92 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 E9PLN8 166 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 SOX1O00570 391 aaPredicted RBP5.37□□□□□ -1.55
PTPN9-204ENST00000564970 FCN1O00602 326 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 PLPP3O14495 311 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 XRCC2O43543 280 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 ETHE1O95571 254 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 CER1O95813 267 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 NUDT14O95848 222 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 EPPINO95925 133 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 CD55P08174 381 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 WNT2P09544 360 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 COX8AP10176 69 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 AMY2BP19961 511 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 RPS12P25398 132 aaKnown RBP5.37□□□□□ -1.55
PTPN9-204ENST00000564970 PEBP1P30086 187 aaKnown RBP5.37□□□□□ -1.55
PTPN9-204ENST00000564970 ZNF83P51522 516 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 FOXG1P55316 489 aaPredicted RBP5.37□□□□□ -1.55
PTPN9-204ENST00000564970 NANOS3P60323 173 aaKnown RBP5.37□□□□□ -1.55
PTPN9-204ENST00000564970 PFN3P60673 137 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 HBG1P69891 147 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 HBG2P69892 147 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 DMWDQ09019 674 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 KLF5Q13887 457 aaPredicted RBP5.37□□□□□ -1.55
PTPN9-204ENST00000564970 PDCD1Q15116 288 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 OR8B8Q15620 311 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 C9orf57Q5W0N0 161 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 EEF1DP3Q658K8 133 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 Q6ZS49 121 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 TPRG1Q6ZUI0 275 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 Q6ZVH6 145 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 TMEM123Q8N131 208 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 SLC22A24Q8N4F4 322 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 TMEM252Q8N6L7 170 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 FADS6Q8N9I5 356 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 OR52E2Q8NGJ4 325 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 OR9G1Q8NH87 305 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 GRAPLQ8TC17 118 aaPredicted RBP5.37□□□□□ -1.55
PTPN9-204ENST00000564970 TMEM171Q8WVE6 324 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 RTN4IP1Q8WWV3 396 aaPredicted RBP5.37□□□□□ -1.55
PTPN9-204ENST00000564970 IGSF8Q969P0 613 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 MSI2Q96DH6 328 aaKnown RBP5.37□□□□□ -1.55
PTPN9-204ENST00000564970 C18orf12Q96KH6 178 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 ADOQ96SZ5 270 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 NRTNQ99748 197 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 C16orf70Q9BSU1 422 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 LMF2Q9BU23 707 aaKnown RBP5.37□□□□□ -1.55
PTPN9-204ENST00000564970 PECRQ9BY49 303 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 MRPL32Q9BYC8 188 aaKnown RBP5.37□□□□□ -1.55
PTPN9-204ENST00000564970 NAA60Q9H7X0 242 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 MED20Q9H944 212 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 SAP30LQ9HAJ7 183 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 ZNF286AQ9HBT8 521 aa5.37□□□□□ -1.55
PTPN9-204ENST00000564970 LYRM4Q9HD34 91 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms