RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 SMIM12Q96EX1 92 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 RSPO3Q9BXY4 272 aaPredicted RBP1.44□□□□□ -2.18
CHD9-209ENST00000564255 SLC22A4Q9H015 551 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 TXNIPQ9H3M7 391 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 HRASLSQ9HDD0 168 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 C19orf12Q9NSK7 152 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 PAIP2BQ9ULR5 123 aaKnown RBP1.44□□□□□ -2.18
CHD9-209ENST00000564255 SLC22A13Q9Y226 551 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 CABIN1Q9Y6J0 2220 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 ZC3H13Q5T200 1668 aaKnown RBP1.44□□□□□ -2.18
CHD9-209ENST00000564255 IGKV1OR2-108A0A075B7D4 117 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 A0A1W2PQL4 384 aaPredicted RBP1.44□□□□□ -2.18
CHD9-209ENST00000564255 F5H5P2 479 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 RGS5O15539 181 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 LYPLA2O95372 231 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 IFNA5P01569 189 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 TNNC2P02585 160 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 RPS17P08708 135 aaKnown RBP1.44□□□□□ -2.18
CHD9-209ENST00000564255 RAP1GDS1P52306 607 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 RAB25P57735 213 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 SPCS3P61009 180 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 TMED2Q15363 201 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 TMEM69Q5SWH9 247 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 ZFAND6Q6FIF0 208 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 C3orf33Q6P1S2 294 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 DEFB132Q7Z7B7 95 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 RPRMLQ8N4K4 120 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 C3orf22Q8N5N4 141 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 C2orf73Q8N5S3 287 aaPredicted RBP1.44□□□□□ -2.18
CHD9-209ENST00000564255 ZNF2Q9BSG1 426 aaPredicted RBP1.44□□□□□ -2.18
CHD9-209ENST00000564255 SCRT1Q9BWW7 348 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 METTL9Q9H1A3 318 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 STOML2Q9UJZ1 356 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 FMN1Q68DA7 1419 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 SAMD9Q5K651 1589 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 RGPD1P0DJD0 1748 aa1.44□□□□□ -2.18
CHD9-209ENST00000564255 EIF3AQ14152 1382 aaKnown RBP1.44□□□□□ -2.18
CHD9-209ENST00000564255 KDM5AP29375 1690 aaKnown RBP1.43□□□□□ -2.18
CHD9-209ENST00000564255 OCM2P0CE71 109 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 C8orf88P0DMB2 117 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 CGB3P0DN86 165 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 CGB7P0DN87 165 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 CTSEP14091 401 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 GABRA1P14867 456 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 F8A1P23610 371 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 TGFBR2P37173 567 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 CCL7P80098 99 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 GTF2BQ00403 316 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 EIF4EBP2Q13542 120 aaPredicted RBP1.43□□□□□ -2.18
CHD9-209ENST00000564255 CCDC153Q494R4 210 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 AKIRIN2Q53H80 203 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 HS3ST5Q8IZT8 346 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 RIBC1Q8N443 379 aaPredicted RBP1.43□□□□□ -2.18
CHD9-209ENST00000564255 RNF182Q8N6D2 247 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 OR5B17Q8NGF7 314 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 OR2V1Q8NHB1 315 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 AP3S1Q92572 193 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 CMTM5Q96DZ9 223 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 REEP6Q96HR9 211 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 PYURFQ96I23 114 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 PRAP1Q96NZ9 151 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 SHANK2-AS3Q9BTD1 123 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 PLA2G12AQ9BZM1 189 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 VSIRQ9H7M9 311 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 INIPQ9NRY2 104 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 BTRCQ9Y297 605 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 ZNF337Q9Y3M9 751 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 ABCA6Q8N139 1617 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 C10orf71Q711Q0 1435 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 TINCRA0A1B0GVN0 87 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 GNG14A0A1W2PPG7 69 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 BIRC5O15392 142 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 PSMG1O95456 288 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 ATP6V1G2O95670 118 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 IGHG2P01859 326 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 TRGV3P03979 118 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 CD79BP40259 229 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 RBX1P62877 108 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 DYNLL1P63167 89 aaKnown RBP1.43□□□□□ -2.18
CHD9-209ENST00000564255 MMDQ15546 238 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 IGFBP7Q16270 282 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 LY6EQ16553 131 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 GUK1Q16774 197 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 HLA-DRB5Q30154 266 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 ZCWPW2Q504Y3 356 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 DNLZQ5SXM8 178 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 SYPL2Q5VXT5 272 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 LAIR2Q6ISS4 152 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 IGFL1Q6UW32 110 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 SPNS3Q6ZMD2 512 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 SMIM15Q7Z3B0 74 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 KRTCAP2Q8N6L1 136 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 OR11L1Q8NGX0 322 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 SMIM19Q96E16 107 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 BATF3Q9NR55 127 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 ERGIC3Q9Y282 383 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 MMACHCQ9Y4U1 282 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 PIK3C2AO00443 1686 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 ANKRD12Q6UB98 2062 aa1.43□□□□□ -2.18
CHD9-209ENST00000564255 ASXL1Q8IXJ9 1541 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms