RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 GNG10P50151 68 aa13.83□□□□□ -0.2
CMTM3-208ENST00000564247 CCR6P51684 374 aa13.83□□□□□ -0.2
CMTM3-208ENST00000564247 RBMS2Q15434 407 aaKnown RBP13.83□□□□□ -0.2
CMTM3-208ENST00000564247 FAM53AQ6NSI3 398 aaPredicted RBP13.83□□□□□ -0.2
CMTM3-208ENST00000564247 LHFPL1Q86WI0 220 aa13.83□□□□□ -0.2
CMTM3-208ENST00000564247 OR8U1Q8NH10 309 aa13.83□□□□□ -0.2
CMTM3-208ENST00000564247 ZFAND1Q8TCF1 268 aa13.83□□□□□ -0.2
CMTM3-208ENST00000564247 TNFRSF14Q92956 283 aa13.83□□□□□ -0.2
CMTM3-208ENST00000564247 TOMM40LQ969M1 308 aa13.83□□□□□ -0.2
CMTM3-208ENST00000564247 SLC5A7Q9GZV3 580 aa13.83□□□□□ -0.2
CMTM3-208ENST00000564247 OR5H14A6NHG9 310 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 J3QR06 171 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 PTTG1O95997 202 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 MMP9P14780 707 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 COX7A1P24310 79 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 SRP14P37108 136 aaKnown RBP13.82□□□□□ -0.2
CMTM3-208ENST00000564247 UCP3P55916 312 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 SURF2Q15527 256 aaPredicted RBP13.82□□□□□ -0.2
CMTM3-208ENST00000564247 CT45A1Q5HYN5 189 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 AADACL3Q5VUY0 350 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 PNKDQ8N490 385 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 LINC00311Q8N616 119 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 CT45A3Q8NHU0 189 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 ZNF596Q8TC21 504 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 MARCH1Q8TCQ1 289 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 SECTM1Q8WVN6 248 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 ABHD14AQ9BUJ0 271 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 ZNF221Q9UK13 617 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 RNF150Q9ULK6 438 aa13.82□□□□□ -0.2
CMTM3-208ENST00000564247 IGHV2-26A0A0B4J1V2 119 aa13.81□□□□□ -0.2
CMTM3-208ENST00000564247 NDUFB6O95139 128 aa13.81□□□□□ -0.2
CMTM3-208ENST00000564247 TCRBP04435 133 aa13.81□□□□□ -0.2
CMTM3-208ENST00000564247 IL3RAP26951 378 aa13.81□□□□□ -0.2
CMTM3-208ENST00000564247 S100GP29377 79 aa13.81□□□□□ -0.2
CMTM3-208ENST00000564247 BTCP35070 178 aa13.81□□□□□ -0.2
CMTM3-208ENST00000564247 ZNF134P52741 427 aa13.81□□□□□ -0.2
CMTM3-208ENST00000564247 SLC25A48Q6ZT89 311 aaKnown RBP13.81□□□□□ -0.2
CMTM3-208ENST00000564247 NRARPQ7Z6K4 114 aa13.81□□□□□ -0.2
CMTM3-208ENST00000564247 SLC38A6Q8IZM9 456 aa13.81□□□□□ -0.2
CMTM3-208ENST00000564247 DUSP18Q8NEJ0 188 aa13.81□□□□□ -0.2
CMTM3-208ENST00000564247 OR13C8Q8NGS7 320 aa13.81□□□□□ -0.2
CMTM3-208ENST00000564247 OR10X1Q8NGY0 326 aa13.81□□□□□ -0.2
CMTM3-208ENST00000564247 LHX4Q969G2 390 aa13.81□□□□□ -0.2
CMTM3-208ENST00000564247 TBX15Q96SF7 602 aa13.81□□□□□ -0.2
CMTM3-208ENST00000564247 PARP12Q9H0J9 701 aaKnown RBP13.81□□□□□ -0.2
CMTM3-208ENST00000564247 PIPOXQ9P0Z9 390 aa13.81□□□□□ -0.2
CMTM3-208ENST00000564247 C14orf166Q9Y224 244 aaKnown RBP13.81□□□□□ -0.2
CMTM3-208ENST00000564247 A0A1W2PPE3 182 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 ST8SIA5O15466 376 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 GPR12P47775 334 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 ABCA11PQ4W5N1 156 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 PLA1AQ53H76 456 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 PLET1Q6UQ28 207 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 CMTM1Q8IZ96 169 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 LYG1Q8N1E2 194 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 TEX29Q8N6K0 151 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 ZDHHC22Q8N966 263 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 ZBTB34Q8NCN2 500 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 ZNF439Q8NDP4 499 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 BEND2Q8NDZ0 799 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 OR11H6Q8NGC7 330 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 CREB3L1Q96BA8 519 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 AKR1E2Q96JD6 320 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 MMP28Q9H239 520 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 OCEL1Q9H607 264 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 AMMECR1Q9Y4X0 333 aaPredicted RBP13.8□□□□□ -0.2
CMTM3-208ENST00000564247 NUBP2Q9Y5Y2 271 aa13.8□□□□□ -0.2
CMTM3-208ENST00000564247 IGKV1D-13A0A0B4J2D9 117 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 HSD17B6O14756 317 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 RAB29O14966 203 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 SLC31A2O15432 143 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 RLN1P04808 185 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 ARG1P05089 322 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 IGKV1-13P0DP09 117 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 UBE2E1P51965 193 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 DLX1P56177 255 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 LGALS4P56470 323 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 PRB3Q04118 309 aaPredicted RBP13.79□□□□□ -0.2
CMTM3-208ENST00000564247 TRIM16LQ309B1 348 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 UTF1Q5T230 341 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 ZNF645Q8N7E2 425 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 MINDY2Q8NBR6 621 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 UPRTQ96BW1 309 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 ZNF486Q96H40 463 aaPredicted RBP13.79□□□□□ -0.2
CMTM3-208ENST00000564247 ABHD14BQ96IU4 210 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 S1PR3Q99500 378 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 AGMATQ9BSE5 352 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 RSRP1Q9BUV0 290 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 FXYD6Q9H0Q3 95 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 OR2D2Q9H210 308 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 CCL28Q9NRJ3 127 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 GPR132Q9UNW8 380 aa13.79□□□□□ -0.2
CMTM3-208ENST00000564247 RNASEK-C17orf49H0YIS7 233 aa13.78□□□□□ -0.2
CMTM3-208ENST00000564247 GPR31O00270 319 aa13.78□□□□□ -0.2
CMTM3-208ENST00000564247 CTSDP07339 412 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-208ENST00000564247 H2AFB2P0C5Z0 115 aa13.78□□□□□ -0.2
CMTM3-208ENST00000564247 GNRHRP30968 328 aa13.78□□□□□ -0.2
CMTM3-208ENST00000564247 KLRD1Q13241 179 aa13.78□□□□□ -0.2
CMTM3-208ENST00000564247 MSMO1Q15800 293 aa13.78□□□□□ -0.2
CMTM3-208ENST00000564247 GPR157Q5UAW9 335 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms