RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 SDF2L1Q9HCN8 221 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 UBE2G2P60604 165 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 LTC4SQ16873 150 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 APOBEC3DQ96AK3 386 aaPredicted RBP10.07□□□□□ -0.8
ABCA3-203ENST00000563623 CISD1Q9NZ45 108 aaKnown RBP10.07□□□□□ -0.8
ABCA3-203ENST00000563623 PITPNC1Q9UKF7 332 aa10.07□□□□□ -0.8
ABCA3-203ENST00000563623 RHBDL1O75783 438 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 NAPSAO96009 420 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 RPLP1P05386 114 aaKnown RBP10.06□□□□□ -0.8
ABCA3-203ENST00000563623 DEFA4P12838 97 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 CEACAM6P40199 344 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 COL10A1Q03692 680 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 CEACAM21Q3KPI0 293 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 MRGPRGQ86SM5 289 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 GGNQ86UU5 652 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 FUT9Q9Y231 359 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 COL5A1P20908 1838 aaPredicted RBP10.06□□□□□ -0.8
ABCA3-203ENST00000563623 DUXBA0A1W2PPF3 345 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 GRPP07492 148 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 EGR1P18146 543 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 ZNF525Q8N782 197 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 GATAD1Q8WUU5 269 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 ABHD14BQ96IU4 210 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 ZPBPQ9BS86 351 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 C11orf1Q9H5F2 150 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 LILRA1O75019 489 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 KLF7O75840 302 aaPredicted RBP10.06□□□□□ -0.8
ABCA3-203ENST00000563623 MAS1LP35410 378 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 PMS2P11Q13670 270 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 ZNF726P1Q15940 193 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 LPAL2Q16609 132 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.06□□□□□ -0.8
ABCA3-203ENST00000563623 MRPL30Q8TCC3 161 aaKnown RBP10.06□□□□□ -0.8
ABCA3-203ENST00000563623 PLPPR2Q96GM1 343 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 WDR54Q9H977 334 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 DLL3Q9NYJ7 618 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 CLN8Q9UBY8 286 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 NAT8Q9UHE5 227 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 RNF115Q9Y4L5 304 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 ICE1Q9Y2F5 2266 aa10.06□□□□□ -0.8
ABCA3-203ENST00000563623 PATE3B3GLJ2 98 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 NXPH2O95156 264 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 LMO1P25800 156 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 PTTG1IPP53801 180 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 TMEM41BQ5BJD5 291 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 LINC00696Q6ZRV3 163 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 Q6ZSR3 168 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 FGF23Q9GZV9 251 aaPredicted RBP10.05□□□□□ -0.8
ABCA3-203ENST00000563623 OR51I2Q9H344 312 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 EP300Q09472 2414 aaPredicted RBP10.05□□□□□ -0.8
ABCA3-203ENST00000563623 LRRC3CA6NJW4 275 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 IL11RAQ14626 422 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 FFAR4Q5NUL3 377 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 C16orf54Q6UWD8 224 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 DPPA3Q6W0C5 159 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 S100A7AQ86SG5 101 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 ZNF573Q86YE8 665 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 REPIN1Q9BWE0 567 aaKnown RBP10.05□□□□□ -0.8
ABCA3-203ENST00000563623 C1QTNF5Q9BXJ0 243 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 SNHG12Q9BXW3 62 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 DEPPQ9NTK1 212 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 RNF24Q9Y225 148 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 CRYAAP02489 173 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 CELA3AP09093 270 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 G6PCP35575 357 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 B3GALT5-AS1P59052 145 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 GNG3P63215 75 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 MEF2BQ02080 365 aaPredicted RBP10.05□□□□□ -0.8
ABCA3-203ENST00000563623 P2RY6Q15077 328 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 TAF15Q92804 592 aaKnown RBP eCLIP10.05□□□□□ -0.8
ABCA3-203ENST00000563623 APH1AQ96BI3 265 aa10.05□□□□□ -0.8
ABCA3-203ENST00000563623 NOL4LQ96MY1 436 aaPredicted RBP10.05□□□□□ -0.8
ABCA3-203ENST00000563623 PINLYPA6NC86 204 aa10.04□□□□□ -0.8
ABCA3-203ENST00000563623 PAGE4O60829 102 aa10.04□□□□□ -0.8
ABCA3-203ENST00000563623 SELEP16581 610 aa10.04□□□□□ -0.8
ABCA3-203ENST00000563623 FAM3BP58499 235 aaPredicted RBP10.04□□□□□ -0.8
ABCA3-203ENST00000563623 CXorf67Q86X51 503 aaPredicted RBP10.04□□□□□ -0.8
ABCA3-203ENST00000563623 OR10G4Q8NGN3 311 aa10.04□□□□□ -0.8
ABCA3-203ENST00000563623 OR10G9Q8NGN4 311 aa10.04□□□□□ -0.8
ABCA3-203ENST00000563623 OR10G7Q8NGN6 311 aa10.04□□□□□ -0.8
ABCA3-203ENST00000563623 OR1P1Q8NH06 330 aa10.04□□□□□ -0.8
ABCA3-203ENST00000563623 SAP25Q8TEE9 199 aa10.04□□□□□ -0.8
ABCA3-203ENST00000563623 HES7Q9BYE0 225 aa10.04□□□□□ -0.8
ABCA3-203ENST00000563623 PRDM14Q9GZV8 571 aa10.04□□□□□ -0.8
ABCA3-203ENST00000563623 UBE2ZQ9H832 354 aaPredicted RBP10.04□□□□□ -0.8
ABCA3-203ENST00000563623 TMEM9BQ9NQ34 198 aa10.04□□□□□ -0.8
ABCA3-203ENST00000563623 LIN7CQ9NUP9 197 aaKnown RBP10.04□□□□□ -0.8
ABCA3-203ENST00000563623 CEACAM1P13688 526 aa10.04□□□□□ -0.8
ABCA3-203ENST00000563623 ZNF664Q8N3J9 261 aa10.04□□□□□ -0.8
ABCA3-203ENST00000563623 LOC102723996A0A087X1L8 192 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 TRAV24A0A0B4J272 114 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FGF5P12034 268 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 RAC2P15153 192 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 OR3A1P47881 315 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 CEBPDP49716 269 aaPredicted RBP10.03□□□□□ -0.8
ABCA3-203ENST00000563623 RIPPLY2Q5TAB7 128 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 ZNF324BQ6AW86 544 aaPredicted RBP10.03□□□□□ -0.8
ABCA3-203ENST00000563623 PCSK4Q6UW60 755 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 BTNL3Q6UXE8 466 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 PINX1Q96BK5 328 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms