RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 CTRLP40313 264 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 FXYD4P59646 89 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 MRPS34P82930 218 aaKnown RBP5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 ZXDAP98168 799 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 RUNX1Q01196 453 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF154Q13106 437 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 OR5I1Q13606 314 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 PLPPR5Q32ZL2 321 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 CD300EQ496F6 205 aaPredicted RBP5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 C10orf128Q5T292 105 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 MEX3BQ6ZN04 569 aaKnown RBP5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 LINC01551Q86U37 167 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 TBC1D26Q86UD7 250 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 PNKDQ8N490 385 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 KLHDC1Q8N7A1 406 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 MRPL43Q8N983 215 aaKnown RBP5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 GJC3Q8NFK1 279 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 MBD3L2Q8NHZ7 208 aaPredicted RBP5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 MRPL30Q8TCC3 161 aaKnown RBP5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 TMEM37Q8WXS4 190 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 OR5P3Q8WZ94 311 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 CORO2AQ92828 525 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 REEP6Q96HR9 211 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 LYZL4Q96KX0 146 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 RASL10BQ96S79 203 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 RNF2Q99496 336 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 KLHDC3Q9BQ90 382 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 WDR61Q9GZS3 305 aaKnown RBP5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 RIMS4Q9H426 269 aaPredicted RBP5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 SLC39A9Q9NUM3 307 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 LIN7CQ9NUP9 197 aaKnown RBP5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 FOXJ2Q9P0K8 574 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF319Q9P2F9 582 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 SERGEFQ9UGK8 458 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 CHTOPQ9Y3Y2 248 aaKnown RBP5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 TRAPPC1Q9Y5R8 145 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 TRAV30A0A087WSZ9 112 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 IGLV3-32A0A0A0MS00 114 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 KIR2DS1A0A191URI9 304 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 SHISA7A6NL88 538 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 VSTM2BA6NLU5 285 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 NPIPA2E9PIF3 369 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 DEGS1O15121 323 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 TRAF3IP2O43734 574 aaPredicted RBP5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 CHST1O43916 411 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 WDR1O75083 606 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 CST7O76096 145 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 TMEM50AO95807 157 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 PDGFBP01127 241 aaPredicted RBP5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 TNFP01375 233 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 MT-ND6P03923 174 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 CD55P08174 381 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 LINC00271P0C7V0 271 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 SELEP16581 610 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 MDKP21741 143 aaPredicted RBP5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 OMGP23515 440 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 TNFRSF4P43489 277 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 KIR2DS4P43632 304 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 EFNA3P52797 238 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 FBXW4P57775 412 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 BPIFB3P59826 476 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 UBE2G2P60604 165 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 GNB2P62879 340 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 RPP30P78346 268 aaKnown RBP5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 C17orf67Q0P5P2 114 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 UBE2V1Q13404 147 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 KIR2DS1Q14954 304 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 MSMO1Q15800 293 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 PRSS8Q16651 343 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 TMEM196Q5HYL7 178 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 CXorf66Q5JRM2 361 aaPredicted RBP5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 TSPO2Q5TGU0 170 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 TMEM42Q69YG0 159 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 DGAT2L7PQ6IED9 249 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 OR8G2PQ6IF36 304 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 PSRC1Q6PGN9 363 aaPredicted RBP5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 PET117Q6UWS5 81 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 LCN15Q6UWW0 184 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 CPEB2Q7Z5Q1 589 aaKnown RBP5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 DEFB128Q7Z7B8 93 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 C1orf174Q8IYL3 243 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 GCNT2Q8N0V5 402 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 OSR2Q8N2R0 312 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 Q8NFD4 153 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 CADM4Q8NFZ8 388 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 OR5AU1Q8NGC0 362 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 OR11L1Q8NGX0 322 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 TAF15Q92804 592 aaKnown RBP eCLIP5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 EXTL1Q92935 676 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 LHX4Q969G2 390 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 SPTSSAQ969W0 71 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 FAM122AQ96E09 287 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 OXGR1Q96P68 337 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 HDHD3Q9BSH5 251 aaPredicted RBP5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 RTN4RQ9BZR6 473 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 UBE2ZQ9H832 354 aaPredicted RBP5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF160Q9HCG1 818 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 FAM60AQ9NP50 221 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF586Q9NXT0 402 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 ELOVL5Q9NYP7 299 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms