RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 HOXD3P31249 432 aaPredicted RBP13.92□□□□□ -0.18
TPM1-218ENST00000559281 MC5RP33032 325 aa13.92□□□□□ -0.18
TPM1-218ENST00000559281 RAB25P57735 213 aa13.92□□□□□ -0.18
TPM1-218ENST00000559281 KRTAP10-11P60412 298 aa13.92□□□□□ -0.18
TPM1-218ENST00000559281 TMEM65Q6PI78 240 aa13.92□□□□□ -0.18
TPM1-218ENST00000559281 LCNL1Q6ZST4 164 aa13.92□□□□□ -0.18
TPM1-218ENST00000559281 EDARADDQ8WWZ3 215 aa13.92□□□□□ -0.18
TPM1-218ENST00000559281 RAX2Q96IS3 184 aa13.92□□□□□ -0.18
TPM1-218ENST00000559281 IFI27L2Q9H2X8 130 aa13.92□□□□□ -0.18
TPM1-218ENST00000559281 AK3Q9UIJ7 227 aa13.92□□□□□ -0.18
TPM1-218ENST00000559281 V9GY05 133 aa13.92□□□□□ -0.18
TPM1-218ENST00000559281 A0A0A6YYD4 124 aa13.91□□□□□ -0.18
TPM1-218ENST00000559281 K7EIL1 84 aa13.91□□□□□ -0.18
TPM1-218ENST00000559281 ST8SIA5O15466 376 aa13.91□□□□□ -0.18
TPM1-218ENST00000559281 HLA-DRB1P01911 266 aa13.91□□□□□ -0.18
TPM1-218ENST00000559281 CEACAM6P40199 344 aa13.91□□□□□ -0.18
TPM1-218ENST00000559281 CFHR3Q02985 330 aa13.91□□□□□ -0.18
TPM1-218ENST00000559281 C5orf64Q2M2E5 130 aa13.91□□□□□ -0.18
TPM1-218ENST00000559281 NPBQ8NG41 125 aa13.91□□□□□ -0.18
TPM1-218ENST00000559281 OR56B1Q8NGI3 324 aa13.91□□□□□ -0.18
TPM1-218ENST00000559281 OR5M8Q8NGP6 311 aa13.91□□□□□ -0.18
TPM1-218ENST00000559281 FAM3DQ96BQ1 224 aa13.91□□□□□ -0.18
TPM1-218ENST00000559281 DUX3Q96PT4 197 aa13.91□□□□□ -0.18
TPM1-218ENST00000559281 GFI1Q99684 422 aa13.91□□□□□ -0.18
TPM1-218ENST00000559281 OR51J1Q9H342 316 aa13.91□□□□□ -0.18
TPM1-218ENST00000559281 C12orf4Q9NQ89 552 aa13.91□□□□□ -0.18
TPM1-218ENST00000559281 OR5H14A6NHG9 310 aa13.9□□□□□ -0.18
TPM1-218ENST00000559281 PDCD5O14737 125 aa13.9□□□□□ -0.18
TPM1-218ENST00000559281 PSMB8P28062 276 aa13.9□□□□□ -0.18
TPM1-218ENST00000559281 MAP2K4P45985 399 aa13.9□□□□□ -0.18
TPM1-218ENST00000559281 VEGFCP49767 419 aa13.9□□□□□ -0.18
TPM1-218ENST00000559281 MRPS15P82914 257 aaKnown RBP13.9□□□□□ -0.18
TPM1-218ENST00000559281 FABP5Q01469 135 aa13.9□□□□□ -0.18
TPM1-218ENST00000559281 DCTN2Q13561 401 aaKnown RBP13.9□□□□□ -0.18
TPM1-218ENST00000559281 C2orf76Q3KRA6 126 aa13.9□□□□□ -0.18
TPM1-218ENST00000559281 IZUMO2Q6UXV1 221 aa13.9□□□□□ -0.18
TPM1-218ENST00000559281 C4orf3Q8WVX3 66 aa13.9□□□□□ -0.18
TPM1-218ENST00000559281 RBMXL1Q96E39 390 aaKnown RBP13.9□□□□□ -0.18
TPM1-218ENST00000559281 RITA1Q96K30 269 aa13.9□□□□□ -0.18
TPM1-218ENST00000559281 CNBD2Q96M20 576 aa13.9□□□□□ -0.18
TPM1-218ENST00000559281 CMSS1Q9BQ75 279 aaKnown RBP13.9□□□□□ -0.18
TPM1-218ENST00000559281 RAB22AQ9UL26 194 aa13.9□□□□□ -0.18
TPM1-218ENST00000559281 WSB1Q9Y6I7 421 aa13.9□□□□□ -0.18
TPM1-218ENST00000559281 DENRO43583 198 aaKnown RBP13.89□□□□□ -0.19
TPM1-218ENST00000559281 RBBP9O75884 186 aa13.89□□□□□ -0.19
TPM1-218ENST00000559281 GSTP1P09211 210 aaKnown RBP13.89□□□□□ -0.19
TPM1-218ENST00000559281 TMEM50BP56557 158 aa13.89□□□□□ -0.19
TPM1-218ENST00000559281 HLA-DRB3P79483 266 aa13.89□□□□□ -0.19
TPM1-218ENST00000559281 TBCEQ15813 527 aaPredicted RBP13.89□□□□□ -0.19
TPM1-218ENST00000559281 ZNF367Q7RTV3 350 aa13.89□□□□□ -0.19
TPM1-218ENST00000559281 ARHGAP5-AS1Q96IT6 56 aa13.89□□□□□ -0.19
TPM1-218ENST00000559281 RNF5Q99942 180 aa13.89□□□□□ -0.19
TPM1-218ENST00000559281 Q9N2K0 584 aa13.89□□□□□ -0.19
TPM1-218ENST00000559281 PARP11Q9NR21 331 aa13.89□□□□□ -0.19
TPM1-218ENST00000559281 IGHV7-81A0A0B4J1V7 117 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 TRAV41A0A0B4J266 112 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 WI2-2373I1.2A0A1W2PRP0 233 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 FOXI3A8MTJ6 420 aaPredicted RBP13.88□□□□□ -0.19
TPM1-218ENST00000559281 H7C2Y5 167 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 ATP6V0E1O15342 81 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 RAMP3O60896 148 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 NDUFA3O95167 84 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 CT45A6P0DMU7 189 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 CT45A5P0DMU8 189 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 CT45A7P0DMV0 189 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 CNTFRP26992 372 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 PPIFP30405 207 aaKnown RBP13.88□□□□□ -0.19
TPM1-218ENST00000559281 CLDN12P56749 244 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 DGCR2P98153 550 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 PLGLAQ15195 96 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 RPL39P5Q59GN2 51 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 ZNF660Q6AZW8 331 aaPredicted RBP13.88□□□□□ -0.19
TPM1-218ENST00000559281 FAM131AQ6UXB0 335 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 ABHD14BQ96IU4 210 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 UBE2E2Q96LR5 201 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 AGMATQ9BSE5 352 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 HDHD3Q9BSH5 251 aaPredicted RBP13.88□□□□□ -0.19
TPM1-218ENST00000559281 PECRQ9BY49 303 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 C11orf54Q9H0W9 315 aaPredicted RBP13.88□□□□□ -0.19
TPM1-218ENST00000559281 ZNF221Q9UK13 617 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 WASHC3Q9Y3C0 194 aa13.88□□□□□ -0.19
TPM1-218ENST00000559281 TRAV1-2A0A0B4J238 106 aa13.87□□□□□ -0.19
TPM1-218ENST00000559281 TRDCB7Z8K6 153 aa13.87□□□□□ -0.19
TPM1-218ENST00000559281 RRHO14718 337 aa13.87□□□□□ -0.19
TPM1-218ENST00000559281 SCTP09683 121 aa13.87□□□□□ -0.19
TPM1-218ENST00000559281 MYL9P24844 172 aa13.87□□□□□ -0.19
TPM1-218ENST00000559281 SERPINB10P48595 397 aa13.87□□□□□ -0.19
TPM1-218ENST00000559281 TMEM267Q0VDI3 215 aaPredicted RBP13.87□□□□□ -0.19
TPM1-218ENST00000559281 DEFB136Q30KP8 78 aa13.87□□□□□ -0.19
TPM1-218ENST00000559281 C9orf66Q5T8R8 295 aa13.87□□□□□ -0.19
TPM1-218ENST00000559281 OR5AN1Q8NGI8 311 aa13.87□□□□□ -0.19
TPM1-218ENST00000559281 PTX4Q96A99 478 aa13.87□□□□□ -0.19
TPM1-218ENST00000559281 OR1A1Q9P1Q5 309 aa13.87□□□□□ -0.19
TPM1-218ENST00000559281 RAB26Q9ULW5 256 aa13.87□□□□□ -0.19
TPM1-218ENST00000559281 VSIG4Q9Y279 399 aa13.87□□□□□ -0.19
TPM1-218ENST00000559281 G3V318 75 aa13.86□□□□□ -0.19
TPM1-218ENST00000559281 H0YJW9 148 aa13.86□□□□□ -0.19
TPM1-218ENST00000559281 IGLV1-40P01703 118 aa13.86□□□□□ -0.19
TPM1-218ENST00000559281 CD3GP09693 182 aa13.86□□□□□ -0.19
TPM1-218ENST00000559281 GADD45AP24522 165 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms