RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 HIST1H1DP16402 221 aaKnown RBP4.1□□□□□ -1.75
CASC4-207ENST00000559037 HNF1AP20823 631 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 PTGFRP43088 359 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 OR3A3P47888 321 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 RBP2P50120 134 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 ATP1B3P54709 279 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 RPS27AP62979 156 aaKnown RBP4.1□□□□□ -1.75
CASC4-207ENST00000559037 CD300CQ08708 224 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 ARFRP1Q13795 201 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 RSU1Q15404 277 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 SURF2Q15527 256 aaPredicted RBP4.1□□□□□ -1.75
CASC4-207ENST00000559037 KISS1Q15726 138 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 CDNFQ49AH0 187 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 VAX1Q5SQQ9 334 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 AVPI1Q5T686 147 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 BPIFB2Q8N4F0 458 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 ZSCAN4Q8NAM6 433 aaPredicted RBP4.1□□□□□ -1.75
CASC4-207ENST00000559037 OR8G5Q8NG78 346 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 OR4D6Q8NGJ1 314 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 OR51S1Q8NGJ8 323 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 OR5H2Q8NGV7 314 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 OR2T35Q8NGX2 323 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 OR13G1Q8NGZ3 307 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 OR51F2Q8NH61 342 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 SECTM1Q8WVN6 248 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 APOBEC3DQ96AK3 386 aaPredicted RBP4.1□□□□□ -1.75
CASC4-207ENST00000559037 SEH1LQ96EE3 360 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 ADAT3Q96EY9 351 aaPredicted RBP4.1□□□□□ -1.75
CASC4-207ENST00000559037 BORCS8Q96FH0 119 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 TIMD4Q96H15 378 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 REEP6Q96HR9 211 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 PHB2Q99623 299 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 FAM110AQ9BQ89 295 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 C1QTNF5Q9BXJ0 243 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 NARFLQ9H6Q4 476 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 ZNF665Q9H7R5 613 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 RHOFQ9HBH0 211 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 TMEM165Q9HC07 324 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.1□□□□□ -1.75
CASC4-207ENST00000559037 DCAF16Q9NXF7 216 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 IL19Q9UHD0 177 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 MGAT4AQ9UM21 535 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 HSPB11Q9Y547 144 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 NPTNQ9Y639 398 aa4.1□□□□□ -1.75
CASC4-207ENST00000559037 NOTCH3Q9UM47 2321 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 MGAM2Q2M2H8 2515 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 TMEM235A6NFC5 223 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 IQCF6A8MYZ5 107 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 USP17L23D6RBM5 183 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 TRAPPC2LH3BP13 241 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 TMEM178BH3BS89 294 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 J3QLI3 93 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 L7N2F9 121 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 FABP7O15540 132 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 MLNRO43193 412 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 AKR7A2O43488 359 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 TIMM8AO60220 97 aaPredicted RBP4.09□□□□□ -1.75
CASC4-207ENST00000559037 GMDSO60547 372 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 FSTL3O95633 263 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 PTBP3O95758 552 aaKnown RBP4.09□□□□□ -1.75
CASC4-207ENST00000559037 NRASP01111 189 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 IGKV3-20P01619 116 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 CD3DP04234 171 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 WNT2P09544 360 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 SLC2A1P11166 492 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 MGMTP16455 207 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 ANOS1P23352 680 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 DTYMKP23919 212 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 CD34P28906 385 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 SRP14P37108 136 aaKnown RBP4.09□□□□□ -1.75
CASC4-207ENST00000559037 NUP62P37198 522 aaPredicted RBP4.09□□□□□ -1.75
CASC4-207ENST00000559037 RBMXP38159 391 aaKnown RBP4.09□□□□□ -1.75
CASC4-207ENST00000559037 PMELP40967 661 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 FUT6P51993 359 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 EFNB2P52799 333 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 NKX2-5P52952 324 aaPredicted RBP4.09□□□□□ -1.75
CASC4-207ENST00000559037 AP2S1P53680 142 aaPredicted RBP4.09□□□□□ -1.75
CASC4-207ENST00000559037 MTCP1P56278 107 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 ARPC4P59998 168 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 TSPAN5P62079 268 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 QRFPP83859 136 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 TNFAIP6P98066 277 aaPredicted RBP4.09□□□□□ -1.75
CASC4-207ENST00000559037 OR8B8Q15620 311 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 SCGB2B2Q4G0G5 96 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 SLC22A6Q4U2R8 563 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 TMEM155Q4W5P6 130 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 OR2T2Q6IF00 324 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 MRPL21Q7Z2W9 205 aaKnown RBP4.09□□□□□ -1.75
CASC4-207ENST00000559037 LINC00596Q86U02 117 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 LYPD6Q86Y78 171 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 C12orf45Q8N5I9 185 aaPredicted RBP4.09□□□□□ -1.75
CASC4-207ENST00000559037 POC1AQ8NBT0 407 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 PXT1Q8NFP0 134 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 OR2Z1Q8NG97 314 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 OR51T1Q8NGJ9 327 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 OR8S1Q8NH09 359 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 OR4K15Q8NH41 348 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 COQ8AQ8NI60 647 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 ITLN1Q8WWA0 313 aa4.09□□□□□ -1.75
CASC4-207ENST00000559037 RAB39BQ96DA2 213 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms