RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 DGCR2P98153 550 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 CFHR3Q02985 330 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 GNMTQ14749 295 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 MORN2Q502X0 79 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 DEFB121Q5J5C9 76 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 VAX1Q5SQQ9 334 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 C6orf141Q5SZD1 244 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 OGFRL1Q5TC84 451 aaPredicted RBP6.32□□□□□ -1.4
TRAF3-205ENST00000558700 GLT8D1Q68CQ7 371 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 SIGIRRQ6IA17 410 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 FAM71F2Q6NXP2 309 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 LYPD6Q86Y78 171 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 MS4A15Q8N5U1 240 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 NANOGP1Q8N7R0 232 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 OR2AK2Q8NG84 335 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 C4orf3Q8WVX3 66 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 GALMQ96C23 342 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 HSPB9Q9BQS6 159 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 CHCHD6Q9BRQ6 235 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 MRPL20Q9BYC9 149 aaKnown RBP6.32□□□□□ -1.4
TRAF3-205ENST00000558700 CHMP1AQ9HD42 196 aaPredicted RBP6.32□□□□□ -1.4
TRAF3-205ENST00000558700 FKBP14Q9NWM8 211 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 STEAP1Q9UHE8 339 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 LINC01548A6NM66 108 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 ZNF736B4DX44 427 aaPredicted RBP6.31□□□□□ -1.4
TRAF3-205ENST00000558700 NBR2O15453 112 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 YPEL1O60688 119 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 RAMP3O60896 148 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 IGHG4P01861 327 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 HLA-DRB1P01911 266 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 IGF1P05019 195 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 CDK1P06493 297 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 SLC2A2P11168 524 aaPredicted RBP6.31□□□□□ -1.4
TRAF3-205ENST00000558700 CDX1P47902 265 aaPredicted RBP6.31□□□□□ -1.4
TRAF3-205ENST00000558700 ZNF134P52741 427 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 ACTBP60709 375 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 RPS27AP62979 156 aaKnown RBP6.31□□□□□ -1.4
TRAF3-205ENST00000558700 KIR2DS1Q14954 304 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 HMGN3Q15651 99 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 DEFB136Q30KP8 78 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 ACSM3Q53FZ2 586 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 HSD17B12Q53GQ0 312 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 LY6G6FQ5SQ64 297 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 C1orf100Q5SVJ3 147 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 C9orf66Q5T8R8 295 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 LAIR2Q6ISS4 152 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 LCNL1Q6ZST4 164 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 ZNF833PQ6ZTB9 187 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 OR52L2PQ8NGH6 319 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 KCNG3Q8TAE7 436 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 KCTD7Q96MP8 289 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 DUX3Q96PT4 197 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 YPEL2Q96QA6 119 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 B9D2Q9BPU9 175 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 ZNF251Q9BRH9 671 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 TMED9Q9BVK6 235 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 DCLRE1BQ9H816 532 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 HEYLQ9NQ87 328 aaPredicted RBP6.31□□□□□ -1.4
TRAF3-205ENST00000558700 PLSCR3Q9NRY6 295 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 KIAA1456Q9P272 454 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 LRRC42Q9Y546 428 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 DNAH3Q8TD57 4116 aa6.31□□□□□ -1.4
TRAF3-205ENST00000558700 SAA2-SAA4A0A096LPE2 208 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 OR5H14A6NHG9 310 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 ATP6V0E1O15342 81 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 OR8U8P0C7N1 319 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 SAA2P0DJI9 122 aaPredicted RBP6.3□□□□□ -1.4
TRAF3-205ENST00000558700 PSMB8P28062 276 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 HTR2CP28335 458 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 VHLP40337 213 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 RANBP1P43487 201 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 LUMP51884 338 aaPredicted RBP6.3□□□□□ -1.4
TRAF3-205ENST00000558700 F2RL1P55085 397 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 FHL3Q13643 280 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 INSL4Q14641 139 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 SPHARQ15513 63 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 GAGE13Q4V321 117 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 FAM27D1Q5T7N8 215 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 RNLSQ5VYX0 342 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 C11orf87Q6NUJ2 197 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 TMEM65Q6PI78 240 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 C6orf201Q7Z4U5 140 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 LRRTM1Q86UE6 522 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 ODF3L1Q8IXM7 274 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 OR6M1Q8NGM8 313 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 MYOZ3Q8TDC0 251 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 IL1F10Q8WWZ1 152 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 UFD1Q92890 307 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 NABP2Q9BQ15 211 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 SULT4A1Q9BR01 284 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 TM2D1Q9BX74 207 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 IFI27L2Q9H2X8 130 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 OR51J1Q9H342 316 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.3□□□□□ -1.4
TRAF3-205ENST00000558700 PARP11Q9NR21 331 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 SCN3BQ9NY72 215 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 PIPOXQ9P0Z9 390 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 MGAT4AQ9UM21 535 aa6.3□□□□□ -1.4
TRAF3-205ENST00000558700 TRAV41A0A0B4J266 112 aa6.29□□□□□ -1.4
TRAF3-205ENST00000558700 TMEM14DPA8MWL7 114 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms