RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 PIGPP57054 158 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 TMEM249Q2WGJ8 235 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 DCAF12L2Q5VW00 463 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 GLDNQ6ZMI3 551 aaPredicted RBP12.15□□□□□ -0.46
VPS18-202ENST00000558474 ZNF66Q6ZN08 573 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 ZNF818PQ6ZRF7 136 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 VMO1Q7Z5L0 202 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 TMED4Q7Z7H5 227 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 LDLRAD3Q86YD5 345 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 TCTEX1D1Q8N7M0 179 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 WFDC11Q8NEX6 87 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 S1PR3Q99500 378 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 PARP12Q9H0J9 701 aaKnown RBP12.15□□□□□ -0.46
VPS18-202ENST00000558474 OR2D2Q9H210 308 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 IFI27L2Q9H2X8 130 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 GPN1Q9HCN4 374 aaPredicted RBP12.15□□□□□ -0.46
VPS18-202ENST00000558474 CCL28Q9NRJ3 127 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 SLC2A9Q9NRM0 540 aa12.15□□□□□ -0.46
VPS18-202ENST00000558474 CR1P17927 2039 aa12.15□□□□□ -0.47
VPS18-202ENST00000558474 PIGBOS1A0A0B4J2F0 54 aa12.14□□□□□ -0.47
VPS18-202ENST00000558474 C7orf66A4D0T2 115 aa12.14□□□□□ -0.47
VPS18-202ENST00000558474 CRYM-AS1A6NIL9 109 aa12.14□□□□□ -0.47
VPS18-202ENST00000558474 RNF212BA8MTL3 300 aa12.14□□□□□ -0.47
VPS18-202ENST00000558474 SNRPGP15A8MWD9 76 aa12.14□□□□□ -0.47
VPS18-202ENST00000558474 ST8SIA5O15466 376 aa12.14□□□□□ -0.47
VPS18-202ENST00000558474 IGLV2-14P01704 120 aa12.14□□□□□ -0.47
VPS18-202ENST00000558474 IGHV4-31P0DP07 118 aa12.14□□□□□ -0.47
VPS18-202ENST00000558474 BAMBIQ13145 260 aa12.14□□□□□ -0.47
VPS18-202ENST00000558474 HLA-DRB5Q30154 266 aa12.14□□□□□ -0.47
VPS18-202ENST00000558474 SGPP2Q8IWX5 399 aa12.14□□□□□ -0.47
VPS18-202ENST00000558474 DRAM1Q8N682 238 aa12.14□□□□□ -0.47
VPS18-202ENST00000558474 RTN4IP1Q8WWV3 396 aaPredicted RBP12.14□□□□□ -0.47
VPS18-202ENST00000558474 GALNT14Q96FL9 552 aa12.14□□□□□ -0.47
VPS18-202ENST00000558474 FAM212BQ9NTI7 297 aaPredicted RBP12.14□□□□□ -0.47
VPS18-202ENST00000558474 HIF1ANQ9NWT6 349 aa12.14□□□□□ -0.47
VPS18-202ENST00000558474 KCNS2Q9ULS6 477 aa12.14□□□□□ -0.47
VPS18-202ENST00000558474 KCNIP3Q9Y2W7 256 aa12.14□□□□□ -0.47
VPS18-202ENST00000558474 HSD17B6O14756 317 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 SLC31A2O15432 143 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 MPPED1O15442 326 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 ANXA3P12429 323 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 ANXA7P20073 488 aaKnown RBP12.13□□□□□ -0.47
VPS18-202ENST00000558474 GNG10P50151 68 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 UBE2E1P51965 193 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 TAGLNQ01995 201 aaKnown RBP12.13□□□□□ -0.47
VPS18-202ENST00000558474 CATR1Q13166 79 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 EIF4EBP1Q13541 118 aaPredicted RBP12.13□□□□□ -0.47
VPS18-202ENST00000558474 TATDN3Q17R31 274 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 ZNF626Q68DY1 528 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 CYB5R2Q6BCY4 276 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 FAM53AQ6NSI3 398 aaPredicted RBP12.13□□□□□ -0.47
VPS18-202ENST00000558474 ODF3L1Q8IXM7 274 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 LYG1Q8N1E2 194 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 ADAD2Q8NCV1 583 aaKnown RBP12.13□□□□□ -0.47
VPS18-202ENST00000558474 OR10X1Q8NGY0 326 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 LEAP2Q969E1 77 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 TMEM230Q96A57 120 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 MSI2Q96DH6 328 aaKnown RBP12.13□□□□□ -0.47
VPS18-202ENST00000558474 ADTRPQ96IZ2 230 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 TBX15Q96SF7 602 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 HSD17B10Q99714 261 aaKnown RBP12.13□□□□□ -0.47
VPS18-202ENST00000558474 NAA60Q9H7X0 242 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 LPAR2Q9HBW0 351 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 SDHAF2Q9NX18 166 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 AUP1Q9Y679 476 aa12.13□□□□□ -0.47
VPS18-202ENST00000558474 POLQO75417 2590 aa12.12□□□□□ -0.47
VPS18-202ENST00000558474 ODF3BA8MYP8 253 aa12.12□□□□□ -0.47
VPS18-202ENST00000558474 TXNL1O43396 289 aa12.12□□□□□ -0.47
VPS18-202ENST00000558474 CREBL2O60519 120 aaPredicted RBP12.12□□□□□ -0.47
VPS18-202ENST00000558474 PGLYRP1O75594 196 aaPredicted RBP12.12□□□□□ -0.47
VPS18-202ENST00000558474 HOXB4P17483 251 aaPredicted RBP12.12□□□□□ -0.47
VPS18-202ENST00000558474 AKR1C4P17516 323 aa12.12□□□□□ -0.47
VPS18-202ENST00000558474 C4orf46Q504U0 113 aa12.12□□□□□ -0.47
VPS18-202ENST00000558474 MINOS1Q5TGZ0 78 aa12.12□□□□□ -0.47
VPS18-202ENST00000558474 HCP5Q6MZN7 132 aa12.12□□□□□ -0.47
VPS18-202ENST00000558474 ZNF833PQ6ZTB9 187 aa12.12□□□□□ -0.47
VPS18-202ENST00000558474 LYG2Q86SG7 212 aa12.12□□□□□ -0.47
VPS18-202ENST00000558474 PNKDQ8N490 385 aa12.12□□□□□ -0.47
VPS18-202ENST00000558474 ABHD14BQ96IU4 210 aa12.12□□□□□ -0.47
VPS18-202ENST00000558474 PCGF1Q9BSM1 259 aa12.12□□□□□ -0.47
VPS18-202ENST00000558474 SIRT7Q9NRC8 400 aa12.12□□□□□ -0.47
VPS18-202ENST00000558474 RNF150Q9ULK6 438 aa12.12□□□□□ -0.47
VPS18-202ENST00000558474 TBL2Q9Y4P3 447 aaKnown RBP12.12□□□□□ -0.47
VPS18-202ENST00000558474 MINOS1-NBL1R4GNA1 71 aa12.12□□□□□ -0.47
VPS18-202ENST00000558474 CSMD2Q7Z408 3487 aa12.12□□□□□ -0.47
VPS18-202ENST00000558474 ARHGAP32A7KAX9 2087 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 SAA2-SAA4A0A096LPE2 208 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 A0A0B4J2A0 478 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 TEX13DA0A0J9YY54 714 aaPredicted RBP12.11□□□□□ -0.47
VPS18-202ENST00000558474 C9orf170A2RU37 121 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 OOSP1A8MZH6 123 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 BUB1B-PAK6H3BSN5 160 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 SFT2D2O95562 160 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 DUS4LO95620 317 aaKnown RBP12.11□□□□□ -0.47
VPS18-202ENST00000558474 TGFAP01135 160 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 IFNA2P01563 188 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 IGHV3-7P01780 117 aa12.11□□□□□ -0.47
VPS18-202ENST00000558474 HLA-AP01891 365 aaKnown RBP12.11□□□□□ -0.47
VPS18-202ENST00000558474 SAA2P0DJI9 122 aaPredicted RBP12.11□□□□□ -0.47
VPS18-202ENST00000558474 VSIG10L2P0DP72 767 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms