RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 OR5T1Q8NG75 326 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 OR11L1Q8NGX0 322 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 RTN4RQ9BZR6 473 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 SEPSECSQ9HD40 501 aaKnown RBP9.3□□□□□ -0.92
USP3-206ENST00000558157 RYDENQ9NUL5 291 aaKnown RBP9.3□□□□□ -0.92
USP3-206ENST00000558157 TIMM9Q9Y5J7 89 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 LHFPL6Q9Y693 200 aa9.3□□□□□ -0.92
USP3-206ENST00000558157 A0A0U1RQK1 487 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 A0A0U1RQV5 110 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 ZNF320A2RRD8 509 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 C17orf51A8MQB3 221 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 FCGR2AP12318 317 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 Q0VFX4 171 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 MSMO1Q15800 293 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 IGF2-ASQ6U949 168 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 UEVLDQ8IX04 471 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 C1orf174Q8IYL3 243 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 KLHDC1Q8N7A1 406 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 LHX4Q969G2 390 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 RPUSD4Q96CM3 377 aaKnown RBP9.29□□□□□ -0.92
USP3-206ENST00000558157 GMPPAQ96IJ6 420 aaPredicted RBP9.29□□□□□ -0.92
USP3-206ENST00000558157 SLC39A9Q9NUM3 307 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 ZNF581Q9P0T4 197 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 CDC42EP3Q9UKI2 254 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 POLR1DQ9Y2S0 133 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 ALPK2Q86TB3 2170 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 MLNRO43193 412 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 NUPR1O60356 82 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 PPYP01298 95 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 FGF8P55075 233 aaPredicted RBP9.29□□□□□ -0.92
USP3-206ENST00000558157 SUMO1P63165 101 aaKnown RBP9.29□□□□□ -0.92
USP3-206ENST00000558157 HBG1P69891 147 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 HBG2P69892 147 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 LRRC75BQ2VPJ9 315 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 C20orf196Q8IYI0 205 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 PLPPR1Q8TBJ4 325 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 VN1R17PQ8TDU5 208 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 HSPB9Q9BQS6 159 aa9.29□□□□□ -0.92
USP3-206ENST00000558157 MRPS16Q9Y3D3 137 aaKnown RBP9.29□□□□□ -0.92
USP3-206ENST00000558157 LOC105371242A0A075B767 164 aa9.28□□□□□ -0.92
USP3-206ENST00000558157 TRAV30A0A087WSZ9 112 aa9.28□□□□□ -0.92
USP3-206ENST00000558157 IGHV2OR16-5A0A0B4J2B6 119 aa9.28□□□□□ -0.92
USP3-206ENST00000558157 IFNL4K9M1U5 179 aa9.28□□□□□ -0.92
USP3-206ENST00000558157 DHRS3O75911 302 aa9.28□□□□□ -0.92
USP3-206ENST00000558157 GLI4P10075 376 aa9.28□□□□□ -0.92
USP3-206ENST00000558157 OPRM1P35372 400 aa9.28□□□□□ -0.92
USP3-206ENST00000558157 HNRNPA3P51991 378 aaKnown RBP9.28□□□□□ -0.92
USP3-206ENST00000558157 RRADP55042 308 aa9.28□□□□□ -0.92
USP3-206ENST00000558157 RTP5Q14D33 572 aa9.28□□□□□ -0.92
USP3-206ENST00000558157 OR1L6Q8NGR2 347 aa9.28□□□□□ -0.92
USP3-206ENST00000558157 RSG1Q9BU20 258 aa9.28□□□□□ -0.92
USP3-206ENST00000558157 ZNF703Q9H7S9 590 aaPredicted RBP9.28□□□□□ -0.92
USP3-206ENST00000558157 BET1LQ9NYM9 111 aa9.28□□□□□ -0.92
USP3-206ENST00000558157 PTPRZ1P23471 2315 aaPredicted RBP9.28□□□□□ -0.92
USP3-206ENST00000558157 FREM2Q5SZK8 3169 aa9.28□□□□□ -0.92
USP3-206ENST00000558157 TMPRSS2O15393 492 aa9.27□□□□□ -0.92
USP3-206ENST00000558157 WDR1O75083 606 aa9.27□□□□□ -0.92
USP3-206ENST00000558157 NRASP01111 189 aa9.27□□□□□ -0.92
USP3-206ENST00000558157 KRASP01116 189 aa9.27□□□□□ -0.92
USP3-206ENST00000558157 LIFP15018 202 aa9.27□□□□□ -0.92
USP3-206ENST00000558157 COMPP49747 757 aaPredicted RBP9.27□□□□□ -0.92
USP3-206ENST00000558157 POU3F1Q03052 451 aaPredicted RBP9.27□□□□□ -0.92
USP3-206ENST00000558157 Q0VG73 95 aa9.27□□□□□ -0.92
USP3-206ENST00000558157 FAM78BQ5VT40 261 aa9.27□□□□□ -0.92
USP3-206ENST00000558157 TMEM211Q6ICI0 200 aa9.27□□□□□ -0.92
USP3-206ENST00000558157 TBC1D26Q86UD7 250 aa9.27□□□□□ -0.92
USP3-206ENST00000558157 VASH2Q86V25 355 aa9.27□□□□□ -0.92
USP3-206ENST00000558157 OR4C5Q8NGB2 326 aa9.27□□□□□ -0.92
USP3-206ENST00000558157 OR5D13Q8NGL4 314 aa9.27□□□□□ -0.92
USP3-206ENST00000558157 OR5B3Q8NH48 314 aa9.27□□□□□ -0.92
USP3-206ENST00000558157 TMEM234Q8WY98 164 aa9.27□□□□□ -0.92
USP3-206ENST00000558157 MRPL13Q9BYD1 178 aaKnown RBP9.27□□□□□ -0.92
USP3-206ENST00000558157 ZNF586Q9NXT0 402 aa9.27□□□□□ -0.92
USP3-206ENST00000558157 A0A1W2PNV4 684 aa9.27□□□□□ -0.93
USP3-206ENST00000558157 RNF212BA8MTL3 300 aa9.27□□□□□ -0.93
USP3-206ENST00000558157 IGLC2P0DOY2 106 aa9.27□□□□□ -0.93
USP3-206ENST00000558157 IGLC3P0DOY3 106 aa9.27□□□□□ -0.93
USP3-206ENST00000558157 SRSF6Q13247 344 aaKnown RBP9.27□□□□□ -0.93
USP3-206ENST00000558157 FBLN7Q53RD9 439 aa9.27□□□□□ -0.93
USP3-206ENST00000558157 ZNF525Q8N782 197 aa9.27□□□□□ -0.93
USP3-206ENST00000558157 OR10G3Q8NGC4 313 aa9.27□□□□□ -0.93
USP3-206ENST00000558157 SPSB1Q96BD6 273 aa9.27□□□□□ -0.93
USP3-206ENST00000558157 SPACA9Q96E40 222 aaPredicted RBP9.27□□□□□ -0.93
USP3-206ENST00000558157 NEIL1Q96FI4 390 aaPredicted RBP9.27□□□□□ -0.93
USP3-206ENST00000558157 TXN2Q99757 166 aa9.27□□□□□ -0.93
USP3-206ENST00000558157 PNRC2Q9NPJ4 139 aaKnown RBP9.27□□□□□ -0.93
USP3-206ENST00000558157 ELOVL5Q9NYP7 299 aa9.27□□□□□ -0.93
USP3-206ENST00000558157 ST3GAL6Q9Y274 331 aa9.27□□□□□ -0.93
USP3-206ENST00000558157 AQP7O14520 342 aa9.26□□□□□ -0.93
USP3-206ENST00000558157 CNOT4O95628 575 aaKnown RBP9.26□□□□□ -0.93
USP3-206ENST00000558157 GNRHRP30968 328 aa9.26□□□□□ -0.93
USP3-206ENST00000558157 ADMP35318 185 aa9.26□□□□□ -0.93
USP3-206ENST00000558157 TLE3Q04726 772 aa9.26□□□□□ -0.93
USP3-206ENST00000558157 CLEC12BQ2HXU8 276 aa9.26□□□□□ -0.93
USP3-206ENST00000558157 PLPPR5Q32ZL2 321 aa9.26□□□□□ -0.93
USP3-206ENST00000558157 SPATA45Q537H7 98 aa9.26□□□□□ -0.93
USP3-206ENST00000558157 ATP1A1-AS1Q5TC04 95 aa9.26□□□□□ -0.93
USP3-206ENST00000558157 Q6ZS49 121 aa9.26□□□□□ -0.93
USP3-206ENST00000558157 PNKDQ8N490 385 aa9.26□□□□□ -0.93
USP3-206ENST00000558157 CSTL1Q9H114 145 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms