RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 ACOT6Q3I5F7 207 aaPredicted RBP10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 LYSMD4Q5XG99 296 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 DMRTC2Q8IXT2 367 aaPredicted RBP10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 OR2T10Q8NGZ9 312 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 OR4F5Q8NH21 305 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 LURAP1Q96LR2 239 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 OR4F4Q96R69 305 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 PKIBQ9C010 78 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 SLC25A22Q9H936 323 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 RNF212BA8MTL3 300 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 WDR1O75083 606 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 IGHEP01854 428 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 NUBP1P53384 320 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 GFRA1P56159 465 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 ACSM6Q6P461 480 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 FGFRL1Q8N441 504 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 TMEM18Q96B42 140 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 ELOVL1Q9BW60 279 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 ESPL1Q14674 2120 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 TRAV39A0A0B4J263 110 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 HMGB3O15347 200 aaKnown RBP10□□□□□ -0.81
VIPAS39-211ENST00000557658 IGFBP4P22692 258 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 ARR3P36575 388 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 SRP14P37108 136 aaKnown RBP10□□□□□ -0.81
VIPAS39-211ENST00000557658 CXCL12P48061 93 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 TNFRSF9Q07011 255 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 ACTL10Q5JWF8 245 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 OR10G9Q8NGN4 311 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 OR10G7Q8NGN6 311 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 TMEM37Q8WXS4 190 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 TMEM147Q9BVK8 224 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 FSCN3Q9NQT6 498 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 DEPPQ9NTK1 212 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 TRAPPC2LQ9UL33 140 aa10□□□□□ -0.81
VIPAS39-211ENST00000557658 K7ESF4 209 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 GGCTO75223 188 aaKnown RBP9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 GYPAP02724 150 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 SPINK2P20155 84 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 TLE1Q04724 770 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 PLP2Q04941 152 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 HNF4GQ14541 408 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 RTP5Q14D33 572 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 CLEC12BQ2HXU8 276 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 HLA-BQ31612 363 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 Q6P435 159 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 CISD2Q8N5K1 135 aaKnown RBP9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 POM121L2Q96KW2 1035 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 FUT9Q9Y231 359 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 ZNF503-AS2A6NEH8 195 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 VENTXO95231 258 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 TYMSP04818 313 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 COX5AP20674 150 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 CCKARP32238 428 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 OTX2P32243 289 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 SPCS3P61009 180 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 RAB4BP61018 213 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 SLC10A1Q14973 349 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 MSMO1Q15800 293 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 KCNIP4Q6PIL6 250 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 DRAM1Q8N682 238 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 NEIL1Q96FI4 390 aaPredicted RBP9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 DDA1Q9BW61 102 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 OR6C3Q9NZP0 311 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 HSPB7Q9UBY9 170 aa9.99□□□□□ -0.81
VIPAS39-211ENST00000557658 PINLYPA6NC86 204 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 C3orf80F5H4A9 247 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 J3QT63 122 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 CYB561P49447 251 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 FOXG1P55316 489 aaPredicted RBP9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 SRYQ05066 204 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 TRA2AQ13595 282 aaKnown RBP eCLIP9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 ZNF497Q6ZNH5 498 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 TUSC5Q8IXB3 177 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 B4E171 279 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 SIRPB1O00241 398 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 LILRA1O75019 489 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 RHBDL1O75783 438 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 SYNGR4O95473 234 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 SNRPCP09234 159 aaKnown RBP9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 TSPAN7P41732 249 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 Q0VFX4 171 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 IQCJQ1A5X6 159 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 FFAR4Q5NUL3 377 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 PPP1R32Q7Z5V6 425 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 MRPL41Q8IXM3 137 aaKnown RBP9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 UBALD1Q8TB05 177 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 GATAD1Q8WUU5 269 aa9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 BOKQ9UMX3 212 aaPredicted RBP9.98□□□□□ -0.81
VIPAS39-211ENST00000557658 PAGE4O60829 102 aa9.97□□□□□ -0.81
VIPAS39-211ENST00000557658 ZNF709Q8N972 641 aa9.97□□□□□ -0.81
VIPAS39-211ENST00000557658 OR10P1Q8NGE3 313 aa9.97□□□□□ -0.81
VIPAS39-211ENST00000557658 DIDO1Q9BTC0 2240 aaKnown RBP9.97□□□□□ -0.81
VIPAS39-211ENST00000557658 ARHGAP21Q5T5U3 1957 aa9.97□□□□□ -0.81
VIPAS39-211ENST00000557658 A0A1W2PR80 420 aa9.97□□□□□ -0.81
VIPAS39-211ENST00000557658 OR2H2O95918 312 aa9.97□□□□□ -0.81
VIPAS39-211ENST00000557658 IL18BPO95998 194 aa9.97□□□□□ -0.81
VIPAS39-211ENST00000557658 CA6P23280 308 aa9.97□□□□□ -0.81
VIPAS39-211ENST00000557658 ZNF124Q15973 351 aa9.97□□□□□ -0.81
VIPAS39-211ENST00000557658 TGIF2LXQ8IUE1 241 aa9.97□□□□□ -0.81
VIPAS39-211ENST00000557658 CNN1P51911 297 aaKnown RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms