RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 SLC35G3Q8N808 338 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 ZNF439Q8NDP4 499 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 OR4M1Q8NGD0 313 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 OR4P4Q8NGL7 312 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 OR1P1Q8NH06 330 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 OR1L1Q8NH94 360 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 TAMM41Q96BW9 452 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 RBMXL1Q96E39 390 aaKnown RBP2.06□□□□□ -2.08
TRAV28-201ENST00000557548 SMIM8Q96KF7 97 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 ZNF285Q96NJ3 590 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 BIRC8Q96P09 236 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 SEC22CQ9BRL7 303 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 GINS3Q9BRX5 216 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 MROQ9BYG7 248 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 CCDC90BQ9GZT6 254 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 METTL17Q9H7H0 456 aaPredicted RBP2.06□□□□□ -2.08
TRAV28-201ENST00000557548 LHX9Q9NQ69 397 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 C8orf17Q9NRJ1 99 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 DKKL1Q9UK85 242 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 ANGPT4Q9Y264 503 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 CARHSP1Q9Y2V2 147 aaKnown RBP2.06□□□□□ -2.08
TRAV28-201ENST00000557548 SMAD5-AS1Q9Y6J3 95 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 TMEM56-RWDD3S4R434 201 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 PIK3C2GO75747 1445 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 SCAPERQ9BY12 1400 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 YTHDC2Q9H6S0 1430 aaKnown RBP2.06□□□□□ -2.08
TRAV28-201ENST00000557548 MLH3Q9UHC1 1453 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 MAP3K1Q13233 1512 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 UGGT1Q9NYU2 1555 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 COL16A1Q07092 1604 aaPredicted RBP2.06□□□□□ -2.08
TRAV28-201ENST00000557548 NHSL1Q5SYE7 1610 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 SHPRHQ149N8 1683 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 CRYBG1Q9Y4K1 1723 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 RGPD5Q99666 1765 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 VWA8A3KMH1 1905 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 ZNF318Q5VUA4 2279 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 A0A087WUJ7 227 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 IGKV6-21A0A0C4DH24 114 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 TMEM223A0PJW6 202 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 PQLC2LA1A4F0 135 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 PRORSD1PA6NEY8 169 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 F8W036 122 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 SLC17A3O00476 420 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 BPY2O14599 106 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 PDE6DO43924 150 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 EIF1BO60739 113 aaKnown RBP2.05□□□□□ -2.08
TRAV28-201ENST00000557548 SPAG7O75391 227 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 STK16O75716 305 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 CYB5R3P00387 301 aaPredicted RBP2.05□□□□□ -2.08
TRAV28-201ENST00000557548 IGLV3-25P01717 112 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 IL3P08700 152 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 ZNF688P0C7X2 276 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 OGNP20774 298 aaKnown RBP2.05□□□□□ -2.08
TRAV28-201ENST00000557548 IL3RAP26951 378 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 CD34P28906 385 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 EIF1P41567 113 aaKnown RBP2.05□□□□□ -2.08
TRAV28-201ENST00000557548 OR1E2P47887 323 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 ZNF133P52736 654 aaPredicted RBP2.05□□□□□ -2.08
TRAV28-201ENST00000557548 SLC18A1P54219 525 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 HBG1P69891 147 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 HBG2P69892 147 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 PSG4Q00888 419 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 PRDX1Q06830 199 aaKnown RBP2.05□□□□□ -2.08
TRAV28-201ENST00000557548 C16orf72Q14CZ0 275 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 BATFQ16520 125 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 DEFB116Q30KQ4 102 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 C2orf83Q53S99 150 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 RNASE13Q5GAN3 156 aaKnown RBP2.05□□□□□ -2.08
TRAV28-201ENST00000557548 SAMD13Q5VXD3 122 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 TEX36Q5VZQ5 186 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 GUSBP11Q6P575 273 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 XKRXQ6PP77 449 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 PRNTQ86SH4 94 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 TMEM256Q8N2U0 113 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 EIF4E3Q8N5X7 224 aaKnown RBP2.05□□□□□ -2.08
TRAV28-201ENST00000557548 LINC00337Q8N6G1 96 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 CYB561D1Q8N8Q1 229 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 GRPEL2Q8TAA5 225 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 CIRBP-AS1Q8TBR5 109 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 TMBIM1Q969X1 311 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 BORCS7Q96B45 105 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 FMC1Q96HJ9 113 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 SPACA5Q96QH8 159 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 OR52E6Q96RD3 313 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 MRPL20Q9BYC9 149 aaKnown RBP2.05□□□□□ -2.08
TRAV28-201ENST00000557548 VSIRQ9H7M9 311 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 PLEKHF2Q9H8W4 249 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 DMAC2Q9NW81 257 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 ZNRD1Q9P1U0 126 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 UTP11Q9Y3A2 253 aaKnown RBP2.05□□□□□ -2.08
TRAV28-201ENST00000557548 SLC22A7Q9Y694 548 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 CCNB3Q8WWL7 1395 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 NPHP4O75161 1426 aaPredicted RBP2.05□□□□□ -2.08
TRAV28-201ENST00000557548 PTPRKQ15262 1439 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 IQSEC2Q5JU85 1478 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 ZNF518AQ6AHZ1 1483 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 MBD5Q9P267 1494 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 DIP2AQ14689 1571 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 NWD1Q149M9 1564 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 MAST1Q9Y2H9 1570 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms