RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 SDCBPO00560 298 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-230ENST00000557427 DVL1O14640 695 aa10.21□□□□□ -0.77
SHMT2-230ENST00000557427 OR7C1O76099 320 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-230ENST00000557427 SFT2D2O95562 160 aa10.21□□□□□ -0.77
SHMT2-230ENST00000557427 GLAP06280 429 aa10.21□□□□□ -0.77
SHMT2-230ENST00000557427 AKR1C4P17516 323 aa10.21□□□□□ -0.77
SHMT2-230ENST00000557427 NPY4RP50391 375 aa10.21□□□□□ -0.77
SHMT2-230ENST00000557427 FGL1Q08830 312 aa10.21□□□□□ -0.77
SHMT2-230ENST00000557427 FAM76BQ5HYJ3 339 aa10.21□□□□□ -0.77
SHMT2-230ENST00000557427 TEX36Q5VZQ5 186 aa10.21□□□□□ -0.77
SHMT2-230ENST00000557427 ZNF660Q6AZW8 331 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-230ENST00000557427 HAGHLQ6PII5 290 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-230ENST00000557427 DHRS11Q6UWP2 260 aa10.21□□□□□ -0.77
SHMT2-230ENST00000557427 Q6ZSV7 163 aa10.21□□□□□ -0.77
SHMT2-230ENST00000557427 FGFRL1Q8N441 504 aa10.21□□□□□ -0.77
SHMT2-230ENST00000557427 TMEM86BQ8N661 226 aa10.21□□□□□ -0.77
SHMT2-230ENST00000557427 RTBDNQ9BSG5 229 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-230ENST00000557427 WDR13Q9H1Z4 485 aa10.21□□□□□ -0.77
SHMT2-230ENST00000557427 IFT22Q9H7X7 185 aa10.21□□□□□ -0.77
SHMT2-230ENST00000557427 SPACA1Q9HBV2 294 aa10.21□□□□□ -0.77
SHMT2-230ENST00000557427 TENM2Q9NT68 2774 aa10.21□□□□□ -0.78
SHMT2-230ENST00000557427 DYNC2H1Q8NCM8 4307 aaKnown RBP10.21□□□□□ -0.78
SHMT2-230ENST00000557427 A0A1B0GW55 424 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 RFPL4AA6NLU0 287 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 TMEM210A6NLX4 147 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 RFPL4AL1F8VTS6 287 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 SYNGR1O43759 233 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 GPR137BO60478 399 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 TFF1P04155 84 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 CTSDP07339 412 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-230ENST00000557427 DUX4L2P0CJ85 424 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 DUX4L3P0CJ86 424 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 DUX4L4P0CJ87 422 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 DUX4L5P0CJ88 424 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 DUX4L6P0CJ89 424 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 DUX4L7P0CJ90 424 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 OR5H8P0DN80 308 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 MUC1P15941 1255 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-230ENST00000557427 NFYAP23511 347 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-230ENST00000557427 VAMP1P23763 118 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 RPL15P61313 204 aaKnown RBP10.2□□□□□ -0.78
SHMT2-230ENST00000557427 ARF6P62330 175 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 IKZF1Q13422 519 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 DUX4L9Q6RFH8 374 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-230ENST00000557427 DYRK2Q92630 601 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 WDR89Q96FK6 387 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-230ENST00000557427 ZNF2Q9BSG1 426 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-230ENST00000557427 PCGF1Q9BSM1 259 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 TLNRD1Q9H1K6 362 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 HEXA-AS1Q9H8Q6 139 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 DNAJB11Q9UBS4 358 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 DUX4Q9UBX2 424 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 SLC23A1Q9UHI7 598 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 C14orf166Q9Y224 244 aaKnown RBP10.2□□□□□ -0.78
SHMT2-230ENST00000557427 POLDIP2Q9Y2S7 368 aa10.2□□□□□ -0.78
SHMT2-230ENST00000557427 TRBV6-6A0A0A6YYG2 114 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 MCRIP1C9JLW8 97 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 F8VVB4 439 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 F8VWA3 439 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-230ENST00000557427 L7N2F9 121 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 ENSAO43768 121 aaKnown RBP10.19□□□□□ -0.78
SHMT2-230ENST00000557427 FCN3O75636 299 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 RHBDL1O75783 438 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 NAPSAO96009 420 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 ACAA1P09110 424 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-230ENST00000557427 PRKACAP17612 351 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 CXCL2P19875 107 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 COL10A1Q03692 680 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 Q8IYB0 196 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 FAM58AQ8N1B3 248 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 FAM216BQ8N7L0 139 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 OR10Z1Q8NGY1 313 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 COQ8AQ8NI60 647 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 CASTOR1Q8WTX7 329 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 RIMS4Q9H426 269 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-230ENST00000557427 C16orf95Q9H693 158 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 POMT1Q9Y6A1 747 aa10.19□□□□□ -0.78
SHMT2-230ENST00000557427 TRAV14DV4A0A0A6YYC5 116 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 NDUFB3O43676 98 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 TSC22D2O75157 780 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 TOX4O94842 621 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 LIPFP07098 398 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 SLC25A4P12235 298 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 PGAM2P15259 253 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 RPA2P15927 270 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 GLRA1P23415 457 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 CFHR2P36980 270 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 GLP1RP43220 463 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 GABRA2P47869 451 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 UCP3P55916 312 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 ERVK11-1P61568 191 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 SUPT4H1P63272 117 aaKnown RBP10.18□□□□□ -0.78
SHMT2-230ENST00000557427 RBM39Q14498 530 aaKnown RBP10.18□□□□□ -0.78
SHMT2-230ENST00000557427 OPCMLQ14982 345 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 TMEM65Q6PI78 240 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 TEX261Q6UWH6 196 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 SLC7A5P1Q8MH63 180 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 OR8H1Q8NGG4 311 aa10.18□□□□□ -0.78
SHMT2-230ENST00000557427 Q9N2K0 584 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms