RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 IL15RAQ13261 267 aa12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 GABRA6Q16445 453 aa12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 Q8IYB0 196 aa12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 CYB561D1Q8N8Q1 229 aa12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 LILRB1Q8NHL6 650 aaPredicted RBP12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 ZNF665Q9H7R5 613 aa12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 LYRM2Q9NU23 88 aaPredicted RBP12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 STRAPQ9Y3F4 350 aaKnown RBP12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 PTPRQQ9UMZ3 2332 aa12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 NUDT19A8MXV4 375 aa12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 H0Y980 276 aa12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 RD3LP0DJH9 198 aa12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 UCP1P25874 307 aa12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 FLI1Q01543 452 aaPredicted RBP12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 BTNL8Q6UX41 500 aa12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 NDRG3Q9UGV2 375 aa12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 TNCP24821 2201 aa12.96□□□□□ -0.34
TMEM55B-207ENST00000557041 NQO2P16083 231 aa12.96□□□□□ -0.34
TMEM55B-207ENST00000557041 MDKP21741 143 aaPredicted RBP12.96□□□□□ -0.34
TMEM55B-207ENST00000557041 NRN1LQ496H8 165 aa12.96□□□□□ -0.34
TMEM55B-207ENST00000557041 PLA2G2CQ5R387 149 aa12.96□□□□□ -0.34
TMEM55B-207ENST00000557041 CST9LP1Q5W188 147 aa12.96□□□□□ -0.34
TMEM55B-207ENST00000557041 INO80CQ6PI98 192 aaPredicted RBP12.96□□□□□ -0.34
TMEM55B-207ENST00000557041 DBX2Q6ZNG2 339 aa12.96□□□□□ -0.34
TMEM55B-207ENST00000557041 PLA2G5P39877 138 aa12.95□□□□□ -0.34
TMEM55B-207ENST00000557041 UBE2G2P60604 165 aa12.95□□□□□ -0.34
TMEM55B-207ENST00000557041 BHLHA15Q7RTS1 189 aaPredicted RBP12.95□□□□□ -0.34
TMEM55B-207ENST00000557041 OR4D5Q8NGN0 318 aa12.95□□□□□ -0.34
TMEM55B-207ENST00000557041 AURKAIP1Q9NWT8 199 aaPredicted RBP12.95□□□□□ -0.34
TMEM55B-207ENST00000557041 S1PR2O95136 353 aa12.95□□□□□ -0.34
TMEM55B-207ENST00000557041 PTBP3O95758 552 aaKnown RBP12.95□□□□□ -0.34
TMEM55B-207ENST00000557041 SELLP14151 372 aa12.95□□□□□ -0.34
TMEM55B-207ENST00000557041 KIR2DL2P43627 348 aaPredicted RBP12.95□□□□□ -0.34
TMEM55B-207ENST00000557041 RAB13P51153 203 aa12.95□□□□□ -0.34
TMEM55B-207ENST00000557041 CCL8P80075 99 aa12.95□□□□□ -0.34
TMEM55B-207ENST00000557041 SLC38A11Q08AI6 406 aa12.95□□□□□ -0.34
TMEM55B-207ENST00000557041 KIAA0141Q14154 515 aaPredicted RBP12.95□□□□□ -0.34
TMEM55B-207ENST00000557041 ADIRFQ15847 76 aa12.95□□□□□ -0.34
TMEM55B-207ENST00000557041 PCSK4Q6UW60 755 aa12.95□□□□□ -0.34
TMEM55B-207ENST00000557041 ZDHHC16Q969W1 377 aa12.95□□□□□ -0.34
TMEM55B-207ENST00000557041 RNF212BA8MTL3 300 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 RHEBQ15382 184 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 ZNF429Q86V71 674 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 SAXO1Q8IYX7 474 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 ATP5SQ99766 215 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 CXXC4Q9H2H0 198 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 ATPIF1Q9UII2 106 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 FAM90A10PA6NDY2 464 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 FAM90A18PA6NE21 464 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 FAM90A16PA6NEW6 464 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 FAM90A20PA6NIJ5 464 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 FAM90A8PA6NJQ4 464 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 FAM90A7PA6NKC0 464 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 FAM90A22PA8MWA6 464 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 FAM90A12PA8MX19 464 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 FAM90A5PA8MXJ8 464 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 FAM90A23PA8MXZ1 464 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 FAM90A15PP0C7V4 464 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 FAM90A13PP0C7W8 464 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 FAM90A14PP0C7W9 464 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 FAM90A24PP0C7X0 464 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 RND3P61587 244 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 FAM27E3Q08E93 113 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 CISD2Q8N5K1 135 aaKnown RBP12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 OR8G5Q8NG78 346 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 OR2V2Q96R30 315 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 C12orf57Q99622 126 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 SULT1A1P50225 295 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 RAB5CP51148 216 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 ERVK-16P61578 105 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 ZNF324BQ6AW86 544 aaPredicted RBP12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 OR5D13Q8NGL4 314 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 OR13A1Q8NGR1 328 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 OR4A16Q8NH70 328 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 RAB40CQ96S21 281 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 PKIBQ9C010 78 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 PLSCR2Q9NRY7 297 aa12.94□□□□□ -0.34
TMEM55B-207ENST00000557041 OR10P1Q8NGE3 313 aa12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 PPP1R35Q8TAP8 253 aa12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 H1FXQ92522 213 aaKnown RBP12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 OR4C12Q96R67 309 aa12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 RPRMQ9NS64 109 aa12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 PRELID3BQ9Y3B1 194 aa12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 IRF2P14316 349 aa12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 HNF1AP20823 631 aa12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 PRDX2P32119 198 aa12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 NKX6-1P78426 367 aaPredicted RBP12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 H1FOOQ8IZA3 346 aaPredicted RBP12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 S100PBPQ96BU1 408 aa12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 ANKHD1Q8IWZ3 2542 aaKnown RBP12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 C17orf98A8MV24 154 aa12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 MLNRO43193 412 aa12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 FGF7P21781 194 aa12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 TMEM56Q96MV1 263 aa12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 VSIRQ9H7M9 311 aa12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 TMEM56-RWDD3S4R434 201 aa12.93□□□□□ -0.34
TMEM55B-207ENST00000557041 ZG16O60844 167 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 NDUFA6P56556 154 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 FOXC1Q12948 553 aa12.92□□□□□ -0.34
TMEM55B-207ENST00000557041 EIF2S3LQ2VIR3 472 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms