RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 RCL1Q9Y2P8 373 aaKnown RBP15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 LRBAP50851 2863 aa15.26■□□□□ 0.03
SDR39U1-220ENST00000556548 A0A0G2JRQ6 117 aa15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 IRF2P14316 349 aa15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 DEFA5Q01523 94 aa15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 OR2B11Q5JQS5 317 aa15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 CXorf66Q5JRM2 361 aaPredicted RBP15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 BTNL3Q6UXE8 466 aa15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 PDZD9Q8IXQ8 264 aa15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 C5orf30Q96GV9 206 aa15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 NKX6-2Q9C056 277 aaPredicted RBP15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 PRORYQ9H606 182 aa15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 C15orf65H3BRN8 121 aa15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 ST8SIA3O43173 380 aa15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 SPINT2O43291 252 aa15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 FGFRL1Q8N441 504 aa15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 PPP1R35Q8TAP8 253 aa15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 BSCL2Q96G97 398 aaPredicted RBP15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 ABHD14BQ96IU4 210 aa15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 AKR1E2Q96JD6 320 aa15.25■□□□□ 0.03
SDR39U1-220ENST00000556548 NMSQ5H8A3 153 aa15.24■□□□□ 0.03
SDR39U1-220ENST00000556548 FAM216BQ8N7L0 139 aa15.24■□□□□ 0.03
SDR39U1-220ENST00000556548 RNASE11Q8TAA1 199 aaKnown RBP15.24■□□□□ 0.03
SDR39U1-220ENST00000556548 ST8SIA5O15466 376 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 IGKV1-39P01597 117 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 IGKV1D-39P04432 117 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 IFNA4P05014 189 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 VDAC1P21796 283 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 LINC00205P59089 165 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 HFEQ30201 348 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 STUMQ69YW2 141 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 ZNF645Q8N7E2 425 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 FAM222BQ8WU58 562 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 SAP30LQ9HAJ7 183 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 DSCAMO60469 2012 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 E5RGE8 158 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 NKX2-1P43699 371 aaPredicted RBP15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 SWI5Q1ZZU3 235 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 RPL7L1Q6DKI1 246 aaKnown RBP15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 SSX8Q7RTT4 187 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 CCL17Q92583 94 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 ERGIC1Q969X5 290 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 PSG11Q9UQ72 335 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 NSG2Q9Y328 171 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 DYSFO75923 2080 aa15.23■□□□□ 0.03
SDR39U1-220ENST00000556548 GATCO43716 136 aaKnown RBP15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 CD3EP07766 207 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 TPT1P13693 172 aaKnown RBP15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 TNFRSF1AP19438 455 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 TMEM33P57088 247 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 ZNF585BQ52M93 769 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 DMBX1Q8NFW5 382 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 Q8TCH9 128 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 CA5BP1Q8WTZ4 195 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 RNASE6Q93091 150 aaKnown RBP15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 GPR146Q96CH1 333 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 GAFA1Q96PS6 74 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 GNG12Q9UBI6 72 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 FBXL17Q9UF56 701 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 POMT1Q9Y6A1 747 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 DIDO1Q9BTC0 2240 aaKnown RBP15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 VSTM5A8MXK1 200 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 SSSCA1O60232 199 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 RPL30P62888 115 aaKnown RBP15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 BAP18Q8IXM2 172 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 ZNF561Q8N587 486 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 TMED6Q8WW62 240 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 PLEKHF2Q9H8W4 249 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 DYNLRB1Q9NP97 96 aa15.22■□□□□ 0.03
SDR39U1-220ENST00000556548 RAMP3O60896 148 aa15.21■□□□□ 0.03
SDR39U1-220ENST00000556548 GZMHP20718 246 aa15.21■□□□□ 0.03
SDR39U1-220ENST00000556548 UTF1Q5T230 341 aa15.21■□□□□ 0.03
SDR39U1-220ENST00000556548 LEAP2Q969E1 77 aa15.21■□□□□ 0.03
SDR39U1-220ENST00000556548 SPIN2AQ99865 258 aa15.21■□□□□ 0.03
SDR39U1-220ENST00000556548 SPIN2BQ9BPZ2 258 aa15.21■□□□□ 0.03
SDR39U1-220ENST00000556548 CACNA1AO00555 2505 aa15.21■□□□□ 0.03
SDR39U1-220ENST00000556548 PAX5Q02548 391 aa15.21■□□□□ 0.02
SDR39U1-220ENST00000556548 Q6ZRM9 215 aa15.21■□□□□ 0.02
SDR39U1-220ENST00000556548 NANPQ8TBE9 248 aa15.21■□□□□ 0.02
SDR39U1-220ENST00000556548 GSN-AS1Q9NRJ2 163 aa15.21■□□□□ 0.02
SDR39U1-220ENST00000556548 LIN7CQ9NUP9 197 aaKnown RBP15.21■□□□□ 0.02
SDR39U1-220ENST00000556548 RAI1Q7Z5J4 1906 aaPredicted RBP15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 LRRC30A6NM36 301 aa15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 TMPRSS2O15393 492 aa15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 SIAH2O43255 324 aa15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 AKR1C2P52895 323 aa15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 NHLH2Q02577 135 aa15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 STOML3Q8TAV4 291 aa15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 IL22RA2Q969J5 263 aa15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 SDSLQ96GA7 329 aa15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 DIRC2Q96SL1 478 aa15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 PLEKHA2Q9HB19 425 aa15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 DUXBA0A1W2PPF3 345 aa15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 IGKV1-5P01602 117 aa15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 SSTP61278 116 aa15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 HTD2P86397 168 aa15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 ZNF816Q0VGE8 651 aaPredicted RBP15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 Q3ZCU0 254 aa15.2■□□□□ 0.02
SDR39U1-220ENST00000556548 TRAT1Q6PIZ9 186 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms