RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 IGHV3-43DP0DP04 118 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 HTR1DP28221 377 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 DYNLT3P51808 116 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 ZNF134P52741 427 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 DEFA1P59665 94 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 DEFA3P59666 94 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 HERV-K104P61576 105 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 TSPAN5P62079 268 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 AADACL3Q5VUY0 350 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 ZNF57Q68EA5 555 aaPredicted RBP9.15□□□□□ -0.94
FOXN3-212ENST00000556541 ZNF833PQ6ZTB9 187 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 C5orf24Q7Z6I8 188 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 ODF3L1Q8IXM7 274 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 OR8H3Q8N146 312 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 ZNF645Q8N7E2 425 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 UBALD1Q8TB05 177 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 LHX4Q969G2 390 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 MALSU1Q96EH3 234 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 SLC6A7Q99884 636 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 ZNF2Q9BSG1 426 aaPredicted RBP9.15□□□□□ -0.94
FOXN3-212ENST00000556541 COPZ2Q9P299 210 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 DPM3Q9P2X0 92 aa9.15□□□□□ -0.94
FOXN3-212ENST00000556541 DNHD1Q96M86 4753 aa9.15□□□□□ -0.95
FOXN3-212ENST00000556541 FAM172BPA6NC97 362 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 M0QYG6 137 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 LYRM1O43325 122 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 ARG1P05089 322 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 AADACP22760 399 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 NFYAP23511 347 aaPredicted RBP9.14□□□□□ -0.95
FOXN3-212ENST00000556541 RND3P61587 244 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 IFITM3Q01628 133 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 TAGLNQ01995 201 aaKnown RBP9.14□□□□□ -0.95
FOXN3-212ENST00000556541 DCTN2Q13561 401 aaKnown RBP9.14□□□□□ -0.95
FOXN3-212ENST00000556541 HABP2Q14520 560 aaPredicted RBP9.14□□□□□ -0.95
FOXN3-212ENST00000556541 FAM120AOSQ5T036 256 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 CCDC144NLQ6NUI1 221 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 MZT2BQ6NZ67 158 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 CLEC9AQ6UXN8 241 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 SLC38A6Q8IZM9 456 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 OR4D10Q8NGI6 311 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 ZNF251Q9BRH9 671 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 FXYD6Q9H0Q3 95 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 MEGF9Q9H1U4 602 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 YAE1D1Q9NRH1 226 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 ABCB10Q9NRK6 738 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 FAM212BQ9NTI7 297 aaPredicted RBP9.14□□□□□ -0.95
FOXN3-212ENST00000556541 ZNF221Q9UK13 617 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 CDC42EP3Q9UKI2 254 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 TBC1D24Q9ULP9 559 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 HIVEP2P31629 2446 aa9.14□□□□□ -0.95
FOXN3-212ENST00000556541 IGKV1D-13A0A0B4J2D9 117 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 OR5H14A6NHG9 310 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 VGLL3A8MV65 326 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 SLC31A2O15432 143 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 IGHV4-38-2P0DP08 117 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 IGKV1-13P0DP09 117 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 EPHA1P21709 976 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 COX7A1P24310 79 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 SLC6A1P30531 599 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 BTCP35070 178 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 SAA4P35542 130 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 ARHGDIBP52566 201 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 LGALS4P56470 323 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 KLRD1Q13241 179 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 EIF4EBP1Q13541 118 aaPredicted RBP9.13□□□□□ -0.95
FOXN3-212ENST00000556541 RBMS2Q15434 407 aaKnown RBP9.13□□□□□ -0.95
FOXN3-212ENST00000556541 LTC4SQ16873 150 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 KRTAP21-3Q3LHN1 58 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 UTF1Q5T230 341 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 TPTE2P1Q5T6R2 138 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 ZNF66Q6ZN08 573 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 LDLRAD3Q86YD5 345 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 TCTEX1D1Q8N7M0 179 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 ZDHHC22Q8N966 263 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 BVESQ8NE79 360 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 OR51S1Q8NGJ8 323 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 OR13C8Q8NGS7 320 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 OR10X1Q8NGY0 326 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 OR56B4Q8NH76 319 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 ZFAND1Q8TCF1 268 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 AJUBAQ96IF1 538 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 ADTRPQ96IZ2 230 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 S1PR3Q99500 378 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 HSD17B10Q99714 261 aaKnown RBP9.13□□□□□ -0.95
FOXN3-212ENST00000556541 RSRP1Q9BUV0 290 aa9.13□□□□□ -0.95
FOXN3-212ENST00000556541 PARP12Q9H0J9 701 aaKnown RBP9.13□□□□□ -0.95
FOXN3-212ENST00000556541 SAA2-SAA4A0A096LPE2 208 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 B3GALNT1O75752 331 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 NDUFB6O95139 128 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 IGLV2-14P01704 120 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 GAPDHP04406 335 aaKnown RBP9.12□□□□□ -0.95
FOXN3-212ENST00000556541 CTSDP07339 412 aaPredicted RBP9.12□□□□□ -0.95
FOXN3-212ENST00000556541 FBP1P09467 338 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 OR8U9P0C7N5 309 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 SAA2P0DJI9 122 aaPredicted RBP9.12□□□□□ -0.95
FOXN3-212ENST00000556541 GNRHRP30968 328 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 GPR12P47775 334 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 GNG10P50151 68 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 UBE2MP61081 183 aaKnown RBP9.12□□□□□ -0.95
FOXN3-212ENST00000556541 FAM53AQ6NSI3 398 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms