RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 HES7Q9BYE0 225 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 ALX4Q9H161 411 aaPredicted RBP4.23□□□□□ -1.73
SRP54-211ENST00000556445 SLC7A10Q9NS82 523 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 MCUBQ9NWR8 336 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 KLK11Q9UBX7 282 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 SLC7A11Q9UPY5 501 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 ALG5Q9Y673 324 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 DNAJC13O75165 2243 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 ZNF816-ZNF321PA0A0X1KG74 233 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 SNRPGP15A8MWD9 76 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 CREBL2O60519 120 aaPredicted RBP4.22□□□□□ -1.73
SRP54-211ENST00000556445 SS18L1O75177 396 aaPredicted RBP4.22□□□□□ -1.73
SRP54-211ENST00000556445 NDUFB6O95139 128 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 RAB3DO95716 219 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 NRASP01111 189 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 IGHG4P01861 327 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 HLA-HP01893 362 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 MT-ND4P03905 459 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 CRHP06850 196 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 MMP7P09237 267 aaPredicted RBP4.22□□□□□ -1.73
SRP54-211ENST00000556445 CTXN2P0C2S0 81 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 RD3LP0DJH9 198 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 SLC2A1P11166 492 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 ABOP16442 354 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 C4BPBP20851 252 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 BTCP35070 178 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 RFC3P40938 356 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 SRP9P49458 86 aaKnown RBP4.22□□□□□ -1.73
SRP54-211ENST00000556445 RBP2P50120 134 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 DSCR9P59020 149 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 GNG2P59768 71 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 KISS1Q15726 138 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 HAGHQ16775 308 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 DEFB109BQ30KR1 87 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 CDNFQ49AH0 187 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 PAN3Q58A45 887 aaKnown RBP4.22□□□□□ -1.73
SRP54-211ENST00000556445 DMRTC1Q5HYR2 192 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 PABPC1L2AQ5JQF8 200 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 ATP1A1-AS1Q5TC04 95 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 ADAM5Q6NVV9 412 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 ZNF774Q6NX45 483 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 GLIPR1L1Q6UWM5 242 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 NUFIP2Q7Z417 695 aaKnown RBP4.22□□□□□ -1.73
SRP54-211ENST00000556445 NAA40Q86UY6 237 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 SKA3Q8IX90 412 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 C1orf174Q8IYL3 243 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 OR5AS1Q8N127 324 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 CHST4Q8NCG5 386 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 FDCSPQ8NFU4 85 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 C8orf46Q8TAG6 207 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 SSC4DQ8WTU2 575 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 AQP3Q92482 292 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 DLX4Q92988 240 aaPredicted RBP4.22□□□□□ -1.73
SRP54-211ENST00000556445 MRPL24Q96A35 216 aaKnown RBP4.22□□□□□ -1.73
SRP54-211ENST00000556445 ISOC2Q96AB3 205 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 SEH1LQ96EE3 360 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 REEP6Q96HR9 211 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 ST6GAL2Q96JF0 529 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 RNF170Q96K19 258 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 SCGB3A2Q96PL1 93 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 PRRT1Q99946 306 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 NIPSNAP3BQ9BS92 247 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 METTL9Q9H1A3 318 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 DEFB127Q9H1M4 99 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 C20orf85Q9H1P6 137 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 PPA2Q9H2U2 334 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 OR51J1Q9H342 316 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 NOX3Q9HBY0 568 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 IFT46Q9NQC8 304 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 ZC4H2Q9NQZ6 224 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 ING4Q9UNL4 249 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 NOP16Q9Y3C1 178 aaKnown RBP4.22□□□□□ -1.73
SRP54-211ENST00000556445 TTC28Q96AY4 2481 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 BDP1A6H8Y1 2624 aa4.22□□□□□ -1.73
SRP54-211ENST00000556445 SZT2Q5T011 3432 aa4.21□□□□□ -1.73
SRP54-211ENST00000556445 hCG_38984A0A1B0GV85 526 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 FAM172BPA6NC97 362 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 ZNF736B4DX44 427 aaPredicted RBP4.21□□□□□ -1.74
SRP54-211ENST00000556445 SSNA1O43805 119 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 LMX1BO60663 402 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 HSBP1O75506 76 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 ATP5LO75964 103 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 C1QBP02746 253 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 CD74P04233 296 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 IFNA6P05013 189 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 CD79AP11912 226 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 HIST1H1DP16402 221 aaKnown RBP4.21□□□□□ -1.74
SRP54-211ENST00000556445 SELEP16581 610 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 AGTR1P30556 359 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 VEGFCP49767 419 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 UBE2NP61088 152 aaKnown RBP4.21□□□□□ -1.74
SRP54-211ENST00000556445 ERVK11-1P61568 191 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 RPS27AP62979 156 aaKnown RBP4.21□□□□□ -1.74
SRP54-211ENST00000556445 QRFPP83859 136 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 PAX2Q02962 417 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 CDK10Q15131 360 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 OR8B8Q15620 311 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 TSC22D1Q15714 1073 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 NDUFA5Q16718 116 aa4.21□□□□□ -1.74
SRP54-211ENST00000556445 GSG1Q2KHT4 349 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms