RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 SCGB1D2O95969 90 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 SERPINE2P07093 398 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 CXCL3P19876 107 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 MRPS11P82912 194 aaKnown RBP8.38□□□□□ -1.07
NEK9-205ENST00000555405 HNF4GQ14541 408 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 CT45A1Q5HYN5 189 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 DRAM1Q8N682 238 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 CLEC18CQ8NCF0 446 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 CT45A3Q8NHU0 189 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 FYTTD1Q96QD9 318 aaKnown RBP8.38□□□□□ -1.07
NEK9-205ENST00000555405 ABHD14AQ9BUJ0 271 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 GFOD1Q9NXC2 390 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 TRBV6-6A0A0A6YYG2 114 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 C9orf170A2RU37 121 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 TGFAP01135 160 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 IGHV2-5P01817 119 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 CD24P25063 80 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 ERP29P30040 261 aaKnown RBP8.37□□□□□ -1.07
NEK9-205ENST00000555405 NKX2-5P52952 324 aaPredicted RBP8.37□□□□□ -1.07
NEK9-205ENST00000555405 LMO4P61968 165 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 C2orf68Q2NKX9 166 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 TMEM128Q5BJH2 165 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 LHFPL1Q86WI0 220 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 EDARADDQ8WWZ3 215 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 TMEM230Q96A57 120 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 WDR89Q96FK6 387 aaPredicted RBP8.37□□□□□ -1.07
NEK9-205ENST00000555405 RANGRFQ9HD47 186 aaPredicted RBP8.37□□□□□ -1.07
NEK9-205ENST00000555405 TNCP24821 2201 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 hCG_1809904A0A1W2PP81 198 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 A0A1W2PPE2 198 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 A0A1W2PR64 198 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 A0A1W2PRV1 198 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 TNFRSF13BO14836 293 aaPredicted RBP8.37□□□□□ -1.07
NEK9-205ENST00000555405 MEF2CQ06413 473 aaPredicted RBP8.37□□□□□ -1.07
NEK9-205ENST00000555405 DIAPH2-AS1Q14236 149 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 TRAT1Q6PIZ9 186 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 AKAP14Q86UN6 197 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 SLC38A6Q8IZM9 456 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 ZDHHC22Q8N966 263 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 CCDC71LQ8N9Z2 235 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 ZNF431Q8TF32 576 aaPredicted RBP8.37□□□□□ -1.07
NEK9-205ENST00000555405 LHX4Q969G2 390 aa8.37□□□□□ -1.07
NEK9-205ENST00000555405 HIVEP2P31629 2446 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 A0A1W2PPH5 198 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 BOLA2-SMG1P6H3BVE0 249 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 MPPED1O15442 326 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 FCGR3BO75015 233 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 USF1P22415 310 aaPredicted RBP8.36□□□□□ -1.07
NEK9-205ENST00000555405 AKR1C2P52895 323 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 SLC25A42Q86VD7 318 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 ZNF695Q8IW36 515 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 TP53RKQ96S44 253 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 SLC2A8Q9NY64 477 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 PGLYRP1O75594 196 aaPredicted RBP8.36□□□□□ -1.07
NEK9-205ENST00000555405 GOSR1O95249 250 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 KRASP01116 189 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 CTSDP07339 412 aaPredicted RBP8.36□□□□□ -1.07
NEK9-205ENST00000555405 IGHV1-8P0DP01 117 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 LGALS4P56470 323 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 TMEM268Q5VZI3 342 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 LPCAT3Q6P1A2 487 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 LYG2Q86SG7 212 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 WFDC11Q8NEX6 87 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 PHB2Q99623 299 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 CABLES2Q9BTV7 478 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 RAB9BQ9NP90 201 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 IFNA2P01563 188 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 LOXL3P58215 753 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 RRAS2P62070 204 aaPredicted RBP8.36□□□□□ -1.07
NEK9-205ENST00000555405 ANKRD55Q3KP44 614 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 CD276Q5ZPR3 534 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 HEPN1Q6WQI6 88 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 MOB3BQ86TA1 216 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 JPT1Q9UK76 154 aa8.36□□□□□ -1.07
NEK9-205ENST00000555405 C3orf85A0A1B0GTC6 90 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 ARG1P05089 322 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 ANXA3P12429 323 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 TAS2R31P59538 309 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 RPL30P62888 115 aaKnown RBP8.35□□□□□ -1.07
NEK9-205ENST00000555405 LYZL2Q7Z4W2 148 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 SPAG16Q8N0X2 631 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 CHAC2Q8WUX2 184 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 GHITMQ9H3K2 345 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 NAA60Q9H7X0 242 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 SDHAF2Q9NX18 166 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 TAS2R3Q9NYW6 316 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 MPTX1A8MV57 137 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 TOX4O94842 621 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 SSX2Q16385 188 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 DCAF12L2Q5VW00 463 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 VKORC1L1Q8N0U8 176 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 COQ8AQ8NI60 647 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 DEDD2Q8WXF8 326 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 C7orf69Q9H7B7 122 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 HIF1ANQ9NWT6 349 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 TRBV23-1A0A0A0MS06 115 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 PRAF2O60831 178 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 FOXH1O75593 365 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 SFT2D2O95562 160 aa8.35□□□□□ -1.07
NEK9-205ENST00000555405 SUPT4H1P63272 117 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms