RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 FXYD3Q14802 87 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 PSG5Q15238 335 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 FAM71F2Q6NXP2 309 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 ZNF529Q6P280 563 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 GLDNQ6ZMI3 551 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-215ENST00000555259 GHSRQ92847 366 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 SNAPC3Q92966 411 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 ASB9Q96DX5 294 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 PELI1Q96FA3 418 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 IFI27L2Q9H2X8 130 aa7.2□□□□□ -1.26
SCFD1-215ENST00000555259 A0A0B4J203 849 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 A0A1W2PP11 408 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 MCRIP1C9JLW8 97 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 H0YJW9 148 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 H7C2Y5 167 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 SPRY2O43597 315 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 YPEL1O60688 119 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 RBBP9O75884 186 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 CT45A6P0DMU7 189 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 CT45A5P0DMU8 189 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 CT45A7P0DMV0 189 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 FASP25445 335 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 KIR2DS2P43631 304 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 Q6ZWC4 215 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 C5orf24Q7Z6I8 188 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 TMEM217Q8N7C4 229 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 OR2AK2Q8NG84 335 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 CCDC124Q96CT7 223 aaKnown RBP7.19□□□□□ -1.26
SCFD1-215ENST00000555259 NRBF2Q96F24 287 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 USMG5Q96IX5 58 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 YPEL2Q96QA6 119 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 TINAGL1Q9GZM7 467 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-215ENST00000555259 SPACA1Q9HBV2 294 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 MBNL3Q9NUK0 354 aaKnown RBP7.19□□□□□ -1.26
SCFD1-215ENST00000555259 WASHC3Q9Y3C0 194 aa7.19□□□□□ -1.26
SCFD1-215ENST00000555259 BMPR1BO00238 502 aa7.18□□□□□ -1.26
SCFD1-215ENST00000555259 RBMXL2O75526 392 aaKnown RBP7.18□□□□□ -1.26
SCFD1-215ENST00000555259 MAS1P04201 325 aa7.18□□□□□ -1.26
SCFD1-215ENST00000555259 FOLR2P14207 255 aa7.18□□□□□ -1.26
SCFD1-215ENST00000555259 EDN2P20800 178 aa7.18□□□□□ -1.26
SCFD1-215ENST00000555259 MC5RP33032 325 aa7.18□□□□□ -1.26
SCFD1-215ENST00000555259 SSBP2P81877 361 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-215ENST00000555259 HTD2P86397 168 aa7.18□□□□□ -1.26
SCFD1-215ENST00000555259 TMED1Q13445 227 aa7.18□□□□□ -1.26
SCFD1-215ENST00000555259 DEFB135Q30KP9 77 aa7.18□□□□□ -1.26
SCFD1-215ENST00000555259 RPL39P5Q59GN2 51 aa7.18□□□□□ -1.26
SCFD1-215ENST00000555259 LY6G6FQ5SQ64 297 aa7.18□□□□□ -1.26
SCFD1-215ENST00000555259 OR5AN1Q8NGI8 311 aa7.18□□□□□ -1.26
SCFD1-215ENST00000555259 TSEN15Q8WW01 171 aaKnown RBP7.18□□□□□ -1.26
SCFD1-215ENST00000555259 RNF5Q99942 180 aa7.18□□□□□ -1.26
SCFD1-215ENST00000555259 PAK1IP1Q9NWT1 392 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-215ENST00000555259 TAS2R4Q9NYW5 299 aa7.18□□□□□ -1.26
SCFD1-215ENST00000555259 ENOPH1Q9UHY7 261 aa7.18□□□□□ -1.26
SCFD1-215ENST00000555259 DAPL1A0PJW8 107 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 C2orf70A6NJV1 201 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 J3QLW9 94 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 J3QRE1 110 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 RAB29O14966 203 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 ST8SIA5O15466 376 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 SPDEFO95238 335 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 GTF2F2P13984 249 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 ZNF19P17023 458 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 HOXB6P17509 224 aaKnown RBP7.17□□□□□ -1.26
SCFD1-215ENST00000555259 LGALS7P47929 136 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 ZNF45Q02386 682 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 DMKNQ6E0U4 476 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-215ENST00000555259 RAB12Q6IQ22 244 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 ZNF554Q86TJ5 538 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 OR52B4Q8NGK2 314 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 RFKQ969G6 155 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 C4orf36Q96KX1 117 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 S100A13Q99584 98 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 JAM3Q9BX67 310 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 TECRQ9NZ01 308 aaKnown RBP7.17□□□□□ -1.26
SCFD1-215ENST00000555259 KCNIP1Q9NZI2 227 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 PIPOXQ9P0Z9 390 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 SELENOKQ9Y6D0 94 aa7.17□□□□□ -1.26
SCFD1-215ENST00000555259 AQP12BA6NM10 295 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 TMEM212A6NML5 194 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 B2RBV5 119 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 ZNF780AO75290 641 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-215ENST00000555259 CA11O75493 328 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 SC5DO75845 299 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 IGKV1-16P04430 117 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 RPSAP08865 295 aaKnown RBP7.16□□□□□ -1.26
SCFD1-215ENST00000555259 ZNF93P35789 620 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-215ENST00000555259 SLC22A6Q4U2R8 563 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 AQP12AQ8IXF9 295 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 TMEM61Q8N0U2 210 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 CYYR1Q96J86 154 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 TMEM68Q96MH6 324 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 TSNAXQ99598 290 aaKnown RBP7.16□□□□□ -1.26
SCFD1-215ENST00000555259 PDCD1LG2Q9BQ51 273 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 FAM107BQ9H098 131 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 RIBC2Q9H4K1 309 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 COA4Q9NYJ1 87 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 GMPPBQ9Y5P6 360 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 FAM90A23PA8MXZ1 464 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 H3BNX3 289 aa7.16□□□□□ -1.26
SCFD1-215ENST00000555259 FKBP6O75344 327 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms