RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TMEM70Q9BUB7 260 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 NRAPQ86VF7 1730 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 FREM1Q5H8C1 2179 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 RPL27AP46776 148 aaKnown RBP6.02□□□□□ -1.45
SYNE2-216ENST00000555002 TMEM196Q5HYL7 178 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 SPNS2Q8IVW8 549 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 KDM3BQ7LBC6 1761 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 FTH1P19P0C7X4 201 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 SPATA45Q537H7 98 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 TEX101Q9BY14 249 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 METTL1Q9UBP6 276 aaKnown RBP6.02□□□□□ -1.45
SYNE2-216ENST00000555002 SORL1Q92673 2214 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 MDKP21741 143 aaPredicted RBP6.02□□□□□ -1.45
SYNE2-216ENST00000555002 ZNF415Q09FC8 603 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 LBHQ53QV2 105 aaPredicted RBP6.02□□□□□ -1.45
SYNE2-216ENST00000555002 SLC17A5Q9NRA2 495 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 MRPL16Q9NX20 251 aaKnown RBP6.02□□□□□ -1.45
SYNE2-216ENST00000555002 SLC25A37Q9NYZ2 338 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 RCC2Q9P258 522 aaKnown RBP6.02□□□□□ -1.45
SYNE2-216ENST00000555002 DOPEY1Q5JWR5 2465 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 PSG2P11465 335 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 SLC35E3Q7Z769 313 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 TCF20Q9UGU0 1960 aaKnown RBP6.02□□□□□ -1.45
SYNE2-216ENST00000555002 IGHV3-35A0A0C4DH35 117 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 TRBV7-9A0A0J9YWB2 115 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 J3QR06 171 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 SRD5A2P31213 254 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 INSL4Q14641 139 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 MBD3L1Q8WWY6 194 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 DNASE2BQ8WZ79 361 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 IGHV1OR21-1A0A087WYE8 117 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 SYNGR1O43759 233 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 TMEM50BP56557 158 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 ST3GAL2Q16842 350 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 PRSS41Q7RTY9 318 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 LINC01587Q99440 93 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 EDA2RQ9HAV5 297 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 IGKV3D-20A0A0C4DH25 116 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 CTAG2O75638 210 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 ZNF707Q96C28 371 aaPredicted RBP6.02□□□□□ -1.45
SYNE2-216ENST00000555002 GMPPAQ96IJ6 420 aaPredicted RBP6.02□□□□□ -1.45
SYNE2-216ENST00000555002 VGLL1Q99990 258 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 CCL28Q9NRJ3 127 aa6.02□□□□□ -1.45
SYNE2-216ENST00000555002 NDUFB6O95139 128 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 MPC2O95563 127 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 SYT11Q9BT88 431 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 HOXB3P14651 431 aaPredicted RBP6.01□□□□□ -1.45
SYNE2-216ENST00000555002 GALNT14Q96FL9 552 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 NUDT16L1Q9BRJ7 211 aaKnown RBP6.01□□□□□ -1.45
SYNE2-216ENST00000555002 TLNRD1Q9H1K6 362 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 OPN4Q9UHM6 478 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 ELOA3CA0A087WX78 387 aaPredicted RBP6.01□□□□□ -1.45
SYNE2-216ENST00000555002 RNASEH2CQ8TDP1 164 aaKnown RBP6.01□□□□□ -1.45
SYNE2-216ENST00000555002 PRELID3AQ96N28 172 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 OR2V2Q96R30 315 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 ATAD5Q96QE3 1844 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 IGLV3-10A0A075B6K4 115 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 NSUN5P1Q3KNT7 163 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 ISOC2Q96AB3 205 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 CNRIP1Q96F85 164 aaPredicted RBP6.01□□□□□ -1.45
SYNE2-216ENST00000555002 IFT22Q9H7X7 185 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 FOXI3A8MTJ6 420 aaPredicted RBP6.01□□□□□ -1.45
SYNE2-216ENST00000555002 GDF9O60383 454 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 C1orf162Q8NEQ5 155 aaPredicted RBP6.01□□□□□ -1.45
SYNE2-216ENST00000555002 MPC1Q9Y5U8 109 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 MRPS18BQ9Y676 258 aaKnown RBP6.01□□□□□ -1.45
SYNE2-216ENST00000555002 KLF9Q13886 244 aaPredicted RBP6.01□□□□□ -1.45
SYNE2-216ENST00000555002 FAM219BQ5XKK7 198 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 RSPO2Q6UXX9 243 aaPredicted RBP6.01□□□□□ -1.45
SYNE2-216ENST00000555002 OR6X1Q8NH79 312 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 DSPPQ9NZW4 1301 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 DLL1O00548 723 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 SLC25A17O43808 307 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 SSTR5P35346 364 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 TMEM136Q6ZRR5 245 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 UCN2Q96RP3 112 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 TJP1Q07157 1748 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 GP1BAP07359 652 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 ZNF488Q96MN9 340 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 WIPI2Q9Y4P8 454 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 B4DEV8 164 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 LDLRAD4O15165 306 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 OR2A4O95047 310 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 ZNF688P0C7X2 276 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 RND2P52198 227 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 EFNB2P52799 333 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 OR4D5Q8NGN0 318 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 MRPL30Q8TCC3 161 aaKnown RBP6.01□□□□□ -1.45
SYNE2-216ENST00000555002 OR2A7Q96R45 310 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 HSPB9Q9BQS6 159 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 SCNM1Q9BWG6 230 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 WBP1LQ9NX94 342 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 SONP18583 2426 aaKnown RBP6.01□□□□□ -1.45
SYNE2-216ENST00000555002 ARAP2Q8WZ64 1704 aa6.01□□□□□ -1.45
SYNE2-216ENST00000555002 IL9P15248 144 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 FUNDC1Q8IVP5 155 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 AMER3Q8N944 861 aa6□□□□□ -1.45
SYNE2-216ENST00000555002 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6□□□□□ -1.45
SYNE2-216ENST00000555002 GAPDHP04406 335 aaKnown RBP6□□□□□ -1.45
SYNE2-216ENST00000555002 ISG15P05161 165 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms