RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 AP1S2P56377 157 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 OR2B6P58173 313 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 LINC00315P59091 139 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 TAS2R39P59534 338 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 ARF6P62330 175 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 ELF3P78545 371 aaPredicted RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 RELAQ04206 551 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 SELENBP1Q13228 472 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 QPRTQ15274 297 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 RGNQ15493 299 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 OR4D1Q15615 310 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 OR7A5Q15622 319 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 BCL2A1Q16548 175 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CEACAM16Q2WEN9 425 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 SPANXN2Q5MJ10 180 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 FAM71E1Q6IPT2 247 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 PPP1R2P3Q6NXS1 205 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 SLC48A1Q6P1K1 146 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 ARL9Q6T311 187 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 PP632Q6XCG6 107 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 COMMD6Q7Z4G1 85 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CMC1Q7Z7K0 106 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 LRRC6Q86X45 466 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 KATNAL2Q8IYT4 538 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF101Q8IZC7 436 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 LRRC18Q8N456 261 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 LINC00471Q8N535 108 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 RNF10Q8N5U6 811 aaKnown RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 COX18Q8N8Q8 333 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 OR2Z1Q8NG97 314 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CLHC1Q8NHS4 586 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 UBALD1Q8TB05 177 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CDS1Q92903 461 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 RAB1CQ92928 201 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 POP5Q969H6 163 aaKnown RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CIDECQ96AQ7 238 aaPredicted RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 TM4SF18Q96CE8 201 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 SEH1LQ96EE3 360 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CCDC42Q96M95 316 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF681Q96N22 645 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 PANX1Q96RD7 426 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 SDHAF3Q9NRP4 125 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 MS4A12Q9NXJ0 267 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 PAQR5Q9NXK6 330 aaPredicted RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CCDC59Q9P031 241 aaKnown RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 EMC3Q9P0I2 261 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 OPTCQ9UBM4 332 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 LINC00527Q9UJ94 153 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF222Q9UK12 451 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 VPREB3Q9UKI3 123 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 ANGPT4Q9Y264 503 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CFL2Q9Y281 166 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 RNF11Q9Y3C5 154 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 FIS1Q9Y3D6 152 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 POLR3HQ9Y535 204 aaPredicted RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 ASB4Q9Y574 426 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 INSIG2Q9Y5U4 225 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 KCNE3Q9Y6H6 103 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 HECTD4Q9Y4D8 3996 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 HUWE1Q7Z6Z7 4374 aaKnown RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 IGLV4-60A0A075B6I1 120 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 TRBV9A0A0B4J1U6 114 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CENPVL3A0A0U1RRI6 287 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 SMKR1H3BMG3 65 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CLDN34H7C241 214 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 J3QLI3 93 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 UPK1AO00322 258 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 DNALI1O14645 258 aaPredicted RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CHST1O43916 411 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 FADS1O60427 444 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 EIF4E2O60573 245 aaKnown RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 FKBP6O75344 327 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 OR2F2O95006 317 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 WISP3O95389 354 aaPredicted RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 RAB36O95755 333 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 IGHV1-46P01743 117 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 SERPINE2P07093 398 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 IGHV1-8P0DP01 117 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CSNK2A2P19784 350 aaPredicted RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 MPV17P39210 176 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CRATP43155 626 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 RWDD2BP57060 319 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 TMEM33P57088 247 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 KLF3P57682 345 aaPredicted RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 MRPS25P82663 173 aaKnown RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 LIPEQ05469 1076 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 EIF4EBP1Q13541 118 aaPredicted RBP0.91□□□□□ -2.26
PRPF39-208ENST00000554785 LINC00483Q53H64 154 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CPTPQ5TA50 214 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 METTL21CQ5VZV1 264 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 CLEC6AQ6EIG7 209 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 NANOGP8Q6NSW7 305 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 PLET1Q6UQ28 207 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 UGT2A3Q6UWM9 527 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 FBXW12Q6X9E4 464 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 TMPPEQ6ZT21 453 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 AAED1Q7RTV5 226 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 VMO1Q7Z5L0 202 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 COMTD1Q86VU5 262 aa0.91□□□□□ -2.26
PRPF39-208ENST00000554785 FAM9CQ8IZT9 166 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms