RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 SMARCD3Q6STE5 483 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 FA2HQ7L5A8 372 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 ZBTB8OSQ8IWT0 167 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 DEFB125Q8N687 156 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 OR51A2Q8NGJ7 313 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 OR2K2Q8NGT1 345 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 OR5H2Q8NGV7 314 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 OR10K1Q8NGX5 313 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 OR10J5Q8NHC4 309 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 C15orf40Q8WUR7 153 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 MIXL1Q9H2W2 232 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 OR52D1Q9H346 318 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 C12orf10Q9HB07 376 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 MRPL27Q9P0M9 148 aaKnown RBP3□□□□□ -1.93
SCFD1-211ENST00000554437 WASHC3Q9Y3C0 194 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 TMEM131Q92545 1883 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 IGLV11-55A0A075B6I3 123 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 IGKV6-21A0A0C4DH24 114 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 IGHV5-51A0A0C4DH38 117 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 EXOC1LA0A1B0GW35 172 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 ZNF729A6NN14 1252 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-211ENST00000554437 GPR31O00270 319 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 FAAHO00519 579 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 CYBAP13498 195 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 PSMB3P49720 205 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 RUNX1Q01196 453 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 C1orf194Q5T5A4 169 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 LPCAT3Q6P1A2 487 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 CYHR1Q6ZMK1 362 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 PDPNQ86YL7 162 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 C20orf196Q8IYI0 205 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 ZNF567Q8N184 647 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 STX19Q8N4C7 294 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 SLC25A29Q8N8R3 303 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 TMEM75Q8N9X5 138 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 ZNF555Q8NEP9 628 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 FAM57AQ8TBR7 257 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 MAFIPQ8WZ33 124 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 APOBEC3DQ96AK3 386 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-211ENST00000554437 LINC00477Q96M19 166 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 ZNF2Q9BSG1 426 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-211ENST00000554437 MARVELD1Q9BSK0 173 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 FAM107BQ9H098 131 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 NOX3Q9HBY0 568 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 LHX9Q9NQ69 397 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 TAC3Q9UHF0 121 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 PCYT1BQ9Y5K3 369 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-211ENST00000554437 PIK3C2GO75747 1445 aa2.99□□□□□ -1.93
SCFD1-211ENST00000554437 ZNFX1Q9P2E3 1918 aaKnown RBP2.99□□□□□ -1.93
SCFD1-211ENST00000554437 DNMT1P26358 1616 aaKnown RBP2.98□□□□□ -1.93
SCFD1-211ENST00000554437 VWA8A3KMH1 1905 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 IGLV4-60A0A075B6I1 120 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 IGHV5-10-1A0A0J9YXX1 117 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 B4DEV8 164 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 FBP1P09467 338 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 SULT1A3P0DMM9 295 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 SULT1A4P0DMN0 295 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 INPP1P49441 399 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 ZNF83P51522 516 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 IAH1Q2TAA2 248 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-211ENST00000554437 SLC16A13Q7RTY0 426 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 GRINAQ7Z429 371 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 OOSP2Q86WS3 158 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 PCP2Q8IVA1 136 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 OR8S1Q8NH09 359 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 GALMQ96C23 342 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 SLC25A44Q96H78 314 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-211ENST00000554437 CDX2Q99626 313 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-211ENST00000554437 AIF1LQ9BQI0 150 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 GINS3Q9BRX5 216 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 FAM96AQ9H5X1 160 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 CA10Q9NS85 328 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 TAS2R1Q9NYW7 299 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 PYCARDQ9ULZ3 195 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 ERGIC3Q9Y282 383 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 SLC35A3Q9Y2D2 325 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 FIS1Q9Y3D6 152 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 SYNMO15061 1565 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 CPDO75976 1380 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 CARMIL3Q8ND23 1372 aa2.98□□□□□ -1.93
SCFD1-211ENST00000554437 GRIN2BQ13224 1484 aa2.97□□□□□ -1.93
SCFD1-211ENST00000554437 NOS1P29475 1434 aa2.97□□□□□ -1.93
SCFD1-211ENST00000554437 WRNQ14191 1432 aaPredicted RBP eCLIP2.97□□□□□ -1.93
SCFD1-211ENST00000554437 ADAMTS13Q76LX8 1427 aa2.97□□□□□ -1.93
SCFD1-211ENST00000554437 IGHV3-72A0A0B4J1Y9 119 aa2.97□□□□□ -1.93
SCFD1-211ENST00000554437 FAM236DA0A1B0GTK5 79 aa2.97□□□□□ -1.93
SCFD1-211ENST00000554437 MRASO14807 208 aa2.97□□□□□ -1.93
SCFD1-211ENST00000554437 RGS5O15539 181 aa2.97□□□□□ -1.93
SCFD1-211ENST00000554437 SCO1O75880 301 aa2.97□□□□□ -1.93
SCFD1-211ENST00000554437 MAS1P04201 325 aa2.97□□□□□ -1.93
SCFD1-211ENST00000554437 SERPINA7P05543 415 aa2.97□□□□□ -1.93
SCFD1-211ENST00000554437 PFN1P07737 140 aaKnown RBP2.97□□□□□ -1.93
SCFD1-211ENST00000554437 SEC11BP0C7V7 166 aa2.97□□□□□ -1.93
SCFD1-211ENST00000554437 ZNF688P0C7X2 276 aa2.97□□□□□ -1.93
SCFD1-211ENST00000554437 IGHV1-8P0DP01 117 aa2.97□□□□□ -1.93
SCFD1-211ENST00000554437 FAM236CP0DP71 79 aa2.97□□□□□ -1.93
SCFD1-211ENST00000554437 FGF6P10767 208 aa2.97□□□□□ -1.93
SCFD1-211ENST00000554437 ORM2P19652 201 aa2.97□□□□□ -1.93
SCFD1-211ENST00000554437 HSPA9P38646 679 aaKnown RBP2.97□□□□□ -1.93
SCFD1-211ENST00000554437 GABARAPL2P60520 117 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms