RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 SHISA2Q6UWI4 295 aa11.87□□□□□ -0.51
SHMT2-208ENST00000553868 GLDNQ6ZMI3 551 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-208ENST00000553868 ZNF841Q6ZN19 808 aa11.87□□□□□ -0.51
SHMT2-208ENST00000553868 OR10V1Q8NGI7 309 aa11.87□□□□□ -0.51
SHMT2-208ENST00000553868 RFESDQ8TAC1 157 aa11.87□□□□□ -0.51
SHMT2-208ENST00000553868 UBALD1Q8TB05 177 aa11.87□□□□□ -0.51
SHMT2-208ENST00000553868 SSBP3Q9BWW4 388 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-208ENST00000553868 hCG_1809904A0A1W2PP81 198 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 A0A1W2PPE2 198 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 A0A1W2PR64 198 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 A0A1W2PRV1 198 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 YPEL1O60688 119 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 SLC22A5O76082 557 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 OR4E1P0C645 316 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 CBX3Q13185 183 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 MSMO1Q15800 293 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 C17orf58Q2M2W7 97 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 TMEM128Q5BJH2 165 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 LY6G6FQ5SQ64 297 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 C5orf24Q7Z6I8 188 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 CMTM1Q8IZ96 169 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 FGFRL1Q8N441 504 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 OR52L2PQ8NGH6 319 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 C8orf46Q8TAG6 207 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 SECTM1Q8WVN6 248 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 DMRTB1Q96MA1 342 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 YPEL2Q96QA6 119 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 RSRP1Q9BUV0 290 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 BPESC1Q9GZL8 116 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 OR51J1Q9H342 316 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 C5orf66Q9H5L9 145 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 BEX1Q9HBH7 125 aa11.86□□□□□ -0.51
SHMT2-208ENST00000553868 A0A0B4J293 547 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 GPR31O00270 319 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 ITGB1BP1O14713 200 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 IGHV2-5P01817 119 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 RBP4P02753 201 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 TRAPPC2P0DI81 140 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 TRAPPC2BP0DI82 140 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 VSIG10L2P0DP72 767 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 AKR1C4P17516 323 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 ZFP36P26651 326 aaKnown RBP11.85□□□□□ -0.51
SHMT2-208ENST00000553868 RAB7AP51149 207 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 BAMBIQ13145 260 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 ZNF273Q14593 569 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 LTC4SQ16873 150 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 Q3ZCU0 254 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 HEPN1Q6WQI6 88 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 TCF23Q7RTU1 214 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 SGPP2Q8IWX5 399 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 CADM3Q8N126 398 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 ZNF431Q8TF32 576 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-208ENST00000553868 AKR1E2Q96JD6 320 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 RTBDNQ9BSG5 229 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-208ENST00000553868 MED28Q9H204 178 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 GHITMQ9H3K2 345 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 NARFLQ9H6Q4 476 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 GFOD1Q9NXC2 390 aa11.85□□□□□ -0.51
SHMT2-208ENST00000553868 RPUSD1Q9UJJ7 312 aaKnown RBP11.85□□□□□ -0.51
SHMT2-208ENST00000553868 LOC105371242A0A075B767 164 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 PPIAL4CA0A0B4J2A2 164 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 TEX13DA0A0J9YY54 714 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-208ENST00000553868 MEX3AA1L020 520 aaKnown RBP11.84□□□□□ -0.51
SHMT2-208ENST00000553868 TRIM77I1YAP6 450 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 SSNA1O43805 119 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 PFDN1O60925 122 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 FCN3O75636 299 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 HLA-AP01891 365 aaKnown RBP11.84□□□□□ -0.51
SHMT2-208ENST00000553868 LIPFP07098 398 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 PPIAL4GP0DN37 164 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 ANXA3P12429 323 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 VAMP1P23763 118 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 PPP1CCP36873 323 aaKnown RBP11.84□□□□□ -0.51
SHMT2-208ENST00000553868 PIGPP57054 158 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 RND3P61587 244 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 GNMTQ14749 295 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 MORN2Q502X0 79 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 ZNF626Q68DY1 528 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 LYG2Q86SG7 212 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 ZBTB34Q8NCN2 500 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 OR2AK2Q8NG84 335 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 CHAC2Q8WUX2 184 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 SEC22CQ9BRL7 303 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 KCNIP3Q9Y2W7 256 aa11.84□□□□□ -0.51
SHMT2-208ENST00000553868 IGHV3-43A0A0B4J1X8 118 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 IGKV1D-13A0A0B4J2D9 117 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 PIGBOS1A0A0B4J2F0 54 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 HMX3A6NHT5 357 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 OR8U9P0C7N5 309 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 IGHV3-43DP0DP04 118 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 IGKV1-13P0DP09 117 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 CCL3L1P16619 93 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 PI3P19957 117 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 NFYBP25208 207 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 GNRHRP30968 328 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 LOXL3P58215 753 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 HILS1P60008 231 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 RRAS2P62070 204 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-208ENST00000553868 DHODHQ02127 395 aa11.83□□□□□ -0.52
SHMT2-208ENST00000553868 DHRS2Q13268 280 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms