RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 HMGN3Q15651 99 aa18.85■□□□□ 0.61
TDP1-205ENST00000553527 C16orf82Q7Z2V1 217 aa18.85■□□□□ 0.61
TDP1-205ENST00000553527 OR2S2Q9NQN1 319 aa18.85■□□□□ 0.61
TDP1-205ENST00000553527 HSD17B6O14756 317 aa18.84■□□□□ 0.61
TDP1-205ENST00000553527 OR2F2O95006 317 aa18.84■□□□□ 0.61
TDP1-205ENST00000553527 GAPDHP04406 335 aaKnown RBP18.84■□□□□ 0.61
TDP1-205ENST00000553527 DTYMKP23919 212 aa18.84■□□□□ 0.61
TDP1-205ENST00000553527 VDAC2P45880 294 aaPredicted RBP18.84■□□□□ 0.61
TDP1-205ENST00000553527 TMEM30BQ3MIR4 351 aa18.84■□□□□ 0.61
TDP1-205ENST00000553527 C9orf152Q5JTZ5 239 aa18.84■□□□□ 0.61
TDP1-205ENST00000553527 CNIH2Q6PI25 160 aa18.84■□□□□ 0.61
TDP1-205ENST00000553527 LYG1Q8N1E2 194 aa18.84■□□□□ 0.61
TDP1-205ENST00000553527 OR52L2PQ8NGH6 319 aa18.84■□□□□ 0.61
TDP1-205ENST00000553527 OCSTAMPQ9BR26 566 aa18.84■□□□□ 0.61
TDP1-205ENST00000553527 MMP27Q9H306 513 aa18.84■□□□□ 0.61
TDP1-205ENST00000553527 MRPS7Q9Y2R9 242 aaKnown RBP18.84■□□□□ 0.61
TDP1-205ENST00000553527 MGAM2Q2M2H8 2515 aa18.84■□□□□ 0.61
TDP1-205ENST00000553527 IGHV3-72A0A0B4J1Y9 119 aa18.83■□□□□ 0.6
TDP1-205ENST00000553527 SSX5O60225 188 aa18.83■□□□□ 0.6
TDP1-205ENST00000553527 TSPAN15O95858 294 aa18.83■□□□□ 0.6
TDP1-205ENST00000553527 LPLP06858 475 aa18.83■□□□□ 0.6
TDP1-205ENST00000553527 ZNF134P52741 427 aa18.83■□□□□ 0.6
TDP1-205ENST00000553527 OR8H3Q8N146 312 aa18.83■□□□□ 0.6
TDP1-205ENST00000553527 LINC00311Q8N616 119 aa18.83■□□□□ 0.6
TDP1-205ENST00000553527 FAM110DQ8TAY7 271 aaPredicted RBP18.83■□□□□ 0.6
TDP1-205ENST00000553527 CFHR4Q92496 578 aa18.83■□□□□ 0.6
TDP1-205ENST00000553527 ZNF230Q9UIE0 474 aaPredicted RBP18.83■□□□□ 0.6
TDP1-205ENST00000553527 A3GALT2U3KPV4 340 aa18.83■□□□□ 0.6
TDP1-205ENST00000553527 IGHV1-3A0A0C4DH29 117 aa18.82■□□□□ 0.6
TDP1-205ENST00000553527 FAM90A9PA6NNJ1 464 aa18.82■□□□□ 0.6
TDP1-205ENST00000553527 IGKV1D-33P01593 117 aa18.82■□□□□ 0.6
TDP1-205ENST00000553527 IGKV1-33P01594 117 aa18.82■□□□□ 0.6
TDP1-205ENST00000553527 PTHLHP12272 177 aa18.82■□□□□ 0.6
TDP1-205ENST00000553527 TMEM11P17152 192 aa18.82■□□□□ 0.6
TDP1-205ENST00000553527 IL3RAP26951 378 aa18.82■□□□□ 0.6
TDP1-205ENST00000553527 GNMTQ14749 295 aa18.82■□□□□ 0.6
TDP1-205ENST00000553527 KIR2DS1Q14954 304 aa18.82■□□□□ 0.6
TDP1-205ENST00000553527 CT45A1Q5HYN5 189 aa18.82■□□□□ 0.6
TDP1-205ENST00000553527 THNSL2Q86YJ6 484 aa18.82■□□□□ 0.6
TDP1-205ENST00000553527 SNX29P2Q8IUI4 249 aa18.82■□□□□ 0.6
TDP1-205ENST00000553527 CT45A3Q8NHU0 189 aa18.82■□□□□ 0.6
TDP1-205ENST00000553527 MAFIPQ8WZ33 124 aa18.82■□□□□ 0.6
TDP1-205ENST00000553527 GALMQ96C23 342 aa18.82■□□□□ 0.6
TDP1-205ENST00000553527 TRDCB7Z8K6 153 aa18.81■□□□□ 0.6
TDP1-205ENST00000553527 CSF1P09603 554 aa18.81■□□□□ 0.6
TDP1-205ENST00000553527 CD28P10747 220 aa18.81■□□□□ 0.6
TDP1-205ENST00000553527 ZNF816Q0VGE8 651 aaPredicted RBP18.81■□□□□ 0.6
TDP1-205ENST00000553527 C2orf68Q2NKX9 166 aa18.81■□□□□ 0.6
TDP1-205ENST00000553527 MORN2Q502X0 79 aa18.81■□□□□ 0.6
TDP1-205ENST00000553527 IL1F10Q8WWZ1 152 aa18.81■□□□□ 0.6
TDP1-205ENST00000553527 DIRAS2Q96HU8 199 aa18.81■□□□□ 0.6
TDP1-205ENST00000553527 FBXO24O75426 580 aa18.8■□□□□ 0.6
TDP1-205ENST00000553527 HLA-DQB1P01920 261 aa18.8■□□□□ 0.6
TDP1-205ENST00000553527 AMY1AP04745 511 aa18.8■□□□□ 0.6
TDP1-205ENST00000553527 AMY2AP04746 511 aa18.8■□□□□ 0.6
TDP1-205ENST00000553527 S100A5P33763 92 aa18.8■□□□□ 0.6
TDP1-205ENST00000553527 PRSS3P35030 304 aa18.8■□□□□ 0.6
TDP1-205ENST00000553527 PPP1CCP36873 323 aaKnown RBP18.8■□□□□ 0.6
TDP1-205ENST00000553527 SRSF7Q16629 238 aaKnown RBP eCLIP18.8■□□□□ 0.6
TDP1-205ENST00000553527 SLC25A48Q6ZT89 311 aaKnown RBP18.8■□□□□ 0.6
TDP1-205ENST00000553527 C8orf31Q8N9H6 132 aa18.8■□□□□ 0.6
TDP1-205ENST00000553527 ZNF439Q8NDP4 499 aa18.8■□□□□ 0.6
TDP1-205ENST00000553527 RTN4IP1Q8WWV3 396 aaPredicted RBP18.8■□□□□ 0.6
TDP1-205ENST00000553527 ST6GALNAC5Q9BVH7 336 aa18.8■□□□□ 0.6
TDP1-205ENST00000553527 JPT1Q9UK76 154 aa18.8■□□□□ 0.6
TDP1-205ENST00000553527 VWFP04275 2813 aa18.79■□□□□ 0.6
TDP1-205ENST00000553527 FABP7O15540 132 aa18.79■□□□□ 0.6
TDP1-205ENST00000553527 SCTP09683 121 aa18.79■□□□□ 0.6
TDP1-205ENST00000553527 CBX5P45973 191 aa18.79■□□□□ 0.6
TDP1-205ENST00000553527 HTD2P86397 168 aa18.79■□□□□ 0.6
TDP1-205ENST00000553527 NSUN5P1Q3KNT7 163 aa18.79■□□□□ 0.6
TDP1-205ENST00000553527 Q3ZCU0 254 aa18.79■□□□□ 0.6
TDP1-205ENST00000553527 STEAP3Q658P3 488 aa18.79■□□□□ 0.6
TDP1-205ENST00000553527 Q6ZS49 121 aa18.79■□□□□ 0.6
TDP1-205ENST00000553527 CENPVQ7Z7K6 275 aaPredicted RBP18.79■□□□□ 0.6
TDP1-205ENST00000553527 OR4A4PQ8NGN8 299 aa18.79■□□□□ 0.6
TDP1-205ENST00000553527 C15orf40Q8WUR7 153 aa18.79■□□□□ 0.6
TDP1-205ENST00000553527 RBMXL1Q96E39 390 aaKnown RBP18.79■□□□□ 0.6
TDP1-205ENST00000553527 IFT46Q9NQC8 304 aa18.79■□□□□ 0.6
TDP1-205ENST00000553527 MOB4Q9Y3A3 225 aa18.79■□□□□ 0.6
TDP1-205ENST00000553527 MEIS3P1A6NDR6 274 aa18.78■□□□□ 0.6
TDP1-205ENST00000553527 TPPPO94811 219 aa18.78■□□□□ 0.6
TDP1-205ENST00000553527 TGIF2LXQ8IUE1 241 aa18.78■□□□□ 0.6
TDP1-205ENST00000553527 ST6GALNAC6Q969X2 333 aa18.78■□□□□ 0.6
TDP1-205ENST00000553527 WNT10AQ9GZT5 417 aa18.78■□□□□ 0.6
TDP1-205ENST00000553527 ZNF736B4DX44 427 aaPredicted RBP18.77■□□□□ 0.6
TDP1-205ENST00000553527 M0QZK8 103 aa18.77■□□□□ 0.6
TDP1-205ENST00000553527 GSTT2P0CG29 244 aa18.77■□□□□ 0.6
TDP1-205ENST00000553527 GSTT2BP0CG30 244 aa18.77■□□□□ 0.6
TDP1-205ENST00000553527 TNFSF8P32971 234 aa18.77■□□□□ 0.6
TDP1-205ENST00000553527 IL18Q14116 193 aa18.77■□□□□ 0.6
TDP1-205ENST00000553527 CNPY1Q3B7I2 92 aa18.77■□□□□ 0.6
TDP1-205ENST00000553527 OR5AU1Q8NGC0 362 aa18.77■□□□□ 0.6
TDP1-205ENST00000553527 CITED2Q99967 270 aaPredicted RBP18.77■□□□□ 0.6
TDP1-205ENST00000553527 SCPEP1Q9HB40 452 aa18.77■□□□□ 0.6
TDP1-205ENST00000553527 SLC23A1Q9UHI7 598 aa18.77■□□□□ 0.6
TDP1-205ENST00000553527 NCBP2LA6PVI3 153 aaKnown RBP18.76■□□□□ 0.59
TDP1-205ENST00000553527 HSPA12AO43301 675 aa18.76■□□□□ 0.59
TDP1-205ENST00000553527 RGS11O94810 467 aa18.76■□□□□ 0.59
TDP1-205ENST00000553527 HOGA1Q86XE5 327 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms