RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 IGLL1P15814 213 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 CTLA4P16410 223 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 TIMP3P35625 211 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 DUSP3P51452 185 aaPredicted RBP4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF83P51522 516 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF121P58317 390 aaPredicted RBP4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 HTD2P86397 168 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 FAM53BQ14153 422 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 SP6Q3SY56 376 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 COX19Q49B96 90 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 CXorf66Q5JRM2 361 aaPredicted RBP4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 CLLU1OSQ5K130 101 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 DCAF12Q5T6F0 453 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 WBP2NLQ6ICG8 309 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 MRPL54Q6P161 138 aaKnown RBP4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 LCN15Q6UWW0 184 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 RPP25LQ8N5L8 163 aaKnown RBP4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 C2orf73Q8N5S3 287 aaPredicted RBP4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 SIGLECL1Q8N7X8 197 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 SCCPDHQ8NBX0 429 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 STXBP6Q8NFX7 210 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 OR2M3Q8NG83 312 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 OR5D14Q8NGL3 314 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 OR11L1Q8NGX0 322 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 ZNF524Q96C55 264 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 SPACA9Q96E40 222 aaPredicted RBP4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 KCNS1Q96KK3 526 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 VSTM2LQ96N03 204 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 PTPN18Q99952 460 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 ST6GALNAC5Q9BVH7 336 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 CLEC7AQ9BXN2 247 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 BANF2Q9H503 90 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 ZDHHC11Q9H8X9 412 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 GNB4Q9HAV0 340 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 PNO1Q9NRX1 252 aaKnown RBP4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 PLA2G3Q9NZ20 509 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 IL36BQ9NZH7 164 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 MCTS1Q9ULC4 181 aaKnown RBP4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 LHFPL6Q9Y693 200 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 LY96Q9Y6Y9 160 aa4.47□□□□□ -1.69
LSM3P2-201ENST00000551246 TRAV26-1A0A087WT03 109 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 CTXND1A0A1B0GTU2 59 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 A0A1W2PP11 408 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 GRIFINA4D1Z8 144 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 C2orf70A6NJV1 201 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 KLRC4-KLRK1H3BQV0 150 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 K7EP34 96 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 MPPED1O15442 326 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 GPR75O95800 540 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 IFNA5P01569 189 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 IGHG4P01861 327 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 SERPINA7P05543 415 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 CT62P0C5K7 136 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 AZU1P20160 251 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 HNRNPA2B1P22626 353 aaKnown RBP4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 CTSSP25774 331 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 CCR2P41597 374 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 OR3A4PP47883 348 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 THBS3P49746 956 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 ZNF133P52736 654 aaPredicted RBP4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 CRYBA4P53673 196 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 CLDN17P56750 224 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 FOXL2P58012 376 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 RPL27P61353 136 aaKnown RBP4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 GNB1P62873 340 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 TLE3Q04726 772 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 ARL16Q0P5N6 197 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 ZNF154Q13106 437 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 ARFRP1Q13795 201 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 KLF5Q13887 457 aaPredicted RBP4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 SRSF7Q16629 238 aaKnown RBP eCLIP4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 CLEC12BQ2HXU8 276 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 SLC25A47Q6Q0C1 308 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 C12orf54Q6X4T0 127 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 TCF23Q7RTU1 214 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 MRPL21Q7Z2W9 205 aaKnown RBP4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 KRTAP1-3Q8IUG1 177 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 OR4N5Q8IXE1 308 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 CCDC71LQ8N9Z2 235 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 OR1N2Q8NGR9 330 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 ZNF501Q96CX3 271 aaPredicted RBP4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 POM121L2Q96KW2 1035 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 FER1L6-AS2Q96M78 137 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 RAB40CQ96S21 281 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 SIGMAR1Q99720 223 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 RAB11FIP5Q9BXF6 653 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 COMMD5Q9GZQ3 224 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 NPFFR1Q9GZQ6 430 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 WDR61Q9GZS3 305 aaKnown RBP4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 PBOV1Q9GZY1 135 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 TXNIPQ9H3M7 391 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 PATZ1Q9HBE1 687 aaKnown RBP4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 NPVFQ9HCQ7 196 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 MBNL1Q9NR56 388 aaKnown RBP4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 TUBG2Q9NRH3 451 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 IL36GQ9NZH8 169 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 TAAR3PQ9P1P4 343 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 ABI3Q9P2A4 366 aa4.46□□□□□ -1.7
LSM3P2-201ENST00000551246 PEF1Q9UBV8 284 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms