RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 ID3Q02535 119 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 KLRB1Q12918 225 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 TUSC1Q2TAM9 212 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 Q3ZCU0 254 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 OR2C3Q8N628 320 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 FAM234AQ9H0X4 552 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 C11orf1Q9H5F2 150 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 WRBO00258 174 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 TNFSF4P23510 183 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 ZNF134P52741 427 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 EWSR1Q01844 656 aaKnown RBP eCLIP17.41■□□□□ 0.38
PRDM4-205ENST00000550376 TLE1Q04724 770 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 SPIN2AQ99865 258 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 SPIN2BQ9BPZ2 258 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 SH3BGRL3Q9H299 93 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 ASH1LQ9NR48 2969 aaKnown RBP17.41■□□□□ 0.38
PRDM4-205ENST00000550376 LINC00473A8K010 186 aa17.4■□□□□ 0.38
PRDM4-205ENST00000550376 C17orf100A8MU93 164 aa17.4■□□□□ 0.38
PRDM4-205ENST00000550376 G6PCP35575 357 aa17.4■□□□□ 0.38
PRDM4-205ENST00000550376 ODF3L1Q8IXM7 274 aa17.4■□□□□ 0.38
PRDM4-205ENST00000550376 HSD17B11Q8NBQ5 300 aa17.4■□□□□ 0.38
PRDM4-205ENST00000550376 CCL17Q92583 94 aa17.4■□□□□ 0.38
PRDM4-205ENST00000550376 AGMATQ9BSE5 352 aa17.4■□□□□ 0.38
PRDM4-205ENST00000550376 SHISA9B4DS77 424 aa17.4■□□□□ 0.38
PRDM4-205ENST00000550376 E7EQL1 145 aa17.4■□□□□ 0.38
PRDM4-205ENST00000550376 TAAR5O14804 337 aa17.4■□□□□ 0.38
PRDM4-205ENST00000550376 FGF2P09038 288 aa17.4■□□□□ 0.38
PRDM4-205ENST00000550376 DMRTC2Q8IXT2 367 aaPredicted RBP17.4■□□□□ 0.38
PRDM4-205ENST00000550376 TCTEX1D2Q8WW35 142 aa17.4■□□□□ 0.38
PRDM4-205ENST00000550376 HRH4Q9H3N8 390 aa17.4■□□□□ 0.38
PRDM4-205ENST00000550376 HRNRQ86YZ3 2850 aaPredicted RBP17.4■□□□□ 0.38
PRDM4-205ENST00000550376 IAPPP10997 89 aa17.39■□□□□ 0.38
PRDM4-205ENST00000550376 SRSF3P84103 164 aaKnown RBP17.39■□□□□ 0.38
PRDM4-205ENST00000550376 RNF141Q8WVD5 230 aa17.39■□□□□ 0.38
PRDM4-205ENST00000550376 MED9Q9NWA0 146 aa17.39■□□□□ 0.38
PRDM4-205ENST00000550376 RALYQ9UKM9 306 aaKnown RBP17.39■□□□□ 0.38
PRDM4-205ENST00000550376 YLPM1P49750 1951 aaKnown RBP17.39■□□□□ 0.37
PRDM4-205ENST00000550376 A8MXK9 166 aa17.39■□□□□ 0.37
PRDM4-205ENST00000550376 PROP1O75360 226 aa17.39■□□□□ 0.37
PRDM4-205ENST00000550376 CA7P43166 264 aa17.39■□□□□ 0.37
PRDM4-205ENST00000550376 PAX9P55771 341 aa17.39■□□□□ 0.37
PRDM4-205ENST00000550376 VAMP2P63027 116 aa17.39■□□□□ 0.37
PRDM4-205ENST00000550376 KDF1Q8NAX2 398 aaPredicted RBP17.39■□□□□ 0.37
PRDM4-205ENST00000550376 LRRC20Q8TCA0 184 aa17.39■□□□□ 0.37
PRDM4-205ENST00000550376 MS4A7Q9GZW8 240 aaPredicted RBP17.39■□□□□ 0.37
PRDM4-205ENST00000550376 NARFLQ9H6Q4 476 aa17.39■□□□□ 0.37
PRDM4-205ENST00000550376 LIN7CQ9NUP9 197 aaKnown RBP17.39■□□□□ 0.37
PRDM4-205ENST00000550376 RNF115Q9Y4L5 304 aa17.39■□□□□ 0.37
PRDM4-205ENST00000550376 DOCK11Q5JSL3 2073 aa17.39■□□□□ 0.37
PRDM4-205ENST00000550376 RAI1Q7Z5J4 1906 aaPredicted RBP17.38■□□□□ 0.37
PRDM4-205ENST00000550376 CLEC18AA5D8T8 446 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 TMPRSS2O15393 492 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 SLC31A2O15432 143 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 FGF16O43320 207 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 FHITP49789 147 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 CASP6P55212 293 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 STUMQ69YW2 141 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 CCDC28AQ8IWP9 274 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 SPAG16Q8N0X2 631 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 TMEM252Q8N6L7 170 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 CLEC18CQ8NCF0 446 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 IL22RA2Q969J5 263 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 GAFA1Q96PS6 74 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.38■□□□□ 0.37
PRDM4-205ENST00000550376 KIAA1324LA8MWY0 1029 aaPredicted RBP17.38■□□□□ 0.37
PRDM4-205ENST00000550376 PITX3O75364 302 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 C1QL1O75973 258 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 JTBO76095 146 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 S1PR2O95136 353 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 RPL39P5Q59GN2 51 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 GPR157Q5UAW9 335 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 ZNF295-AS1Q8N0V1 137 aa17.38■□□□□ 0.37
PRDM4-205ENST00000550376 AGPAT2O15120 278 aa17.37■□□□□ 0.37
PRDM4-205ENST00000550376 MED6O75586 246 aa17.37■□□□□ 0.37
PRDM4-205ENST00000550376 CLDN14O95500 239 aa17.37■□□□□ 0.37
PRDM4-205ENST00000550376 CLDN1O95832 211 aa17.37■□□□□ 0.37
PRDM4-205ENST00000550376 IRF2P14316 349 aa17.37■□□□□ 0.37
PRDM4-205ENST00000550376 GZMHP20718 246 aa17.37■□□□□ 0.37
PRDM4-205ENST00000550376 MORN2Q502X0 79 aa17.37■□□□□ 0.37
PRDM4-205ENST00000550376 C1orf229Q6ZS94 237 aaPredicted RBP17.37■□□□□ 0.37
PRDM4-205ENST00000550376 NARS2Q96I59 477 aaKnown RBP17.37■□□□□ 0.37
PRDM4-205ENST00000550376 CRYZL1O95825 349 aa17.37■□□□□ 0.37
PRDM4-205ENST00000550376 LOXL3P58215 753 aa17.37■□□□□ 0.37
PRDM4-205ENST00000550376 EIF4EBP1Q13541 118 aaPredicted RBP17.37■□□□□ 0.37
PRDM4-205ENST00000550376 MST1LQ2TV78 715 aa17.37■□□□□ 0.37
PRDM4-205ENST00000550376 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.37■□□□□ 0.37
PRDM4-205ENST00000550376 PPP1R35Q8TAP8 253 aa17.37■□□□□ 0.37
PRDM4-205ENST00000550376 FAM222BQ8WU58 562 aa17.37■□□□□ 0.37
PRDM4-205ENST00000550376 TMEM231Q9H6L2 316 aa17.37■□□□□ 0.37
PRDM4-205ENST00000550376 SAP30LQ9HAJ7 183 aa17.37■□□□□ 0.37
PRDM4-205ENST00000550376 ZFP57Q9NU63 452 aa17.37■□□□□ 0.37
PRDM4-205ENST00000550376 DUXBA0A1W2PPF3 345 aa17.36■□□□□ 0.37
PRDM4-205ENST00000550376 MMP23AO75900 390 aa17.36■□□□□ 0.37
PRDM4-205ENST00000550376 NFYBP25208 207 aa17.36■□□□□ 0.37
PRDM4-205ENST00000550376 SUN5Q8TC36 379 aa17.36■□□□□ 0.37
PRDM4-205ENST00000550376 LYRM2Q9NU23 88 aaPredicted RBP17.36■□□□□ 0.37
PRDM4-205ENST00000550376 CALYQ9NYX4 217 aa17.36■□□□□ 0.37
PRDM4-205ENST00000550376 LPAR3Q9UBY5 353 aa17.36■□□□□ 0.37
PRDM4-205ENST00000550376 ARFGEF3Q5TH69 2177 aa17.36■□□□□ 0.37
PRDM4-205ENST00000550376 PVALBP20472 110 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms