RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 SPINT2O43291 252 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 CLDN14O95500 239 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 TNFSF4P23510 183 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 CA7P43166 264 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 GLIPR1P48060 266 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 CEBPDP49716 269 aaPredicted RBP8.3□□□□□ -1.08
RAB5B-206ENST00000549505 ASCL1P50553 236 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 AESQ08117 197 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 PMS2P11Q13670 270 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 MORN2Q502X0 79 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 DMRTC2Q8IXT2 367 aaPredicted RBP8.3□□□□□ -1.08
RAB5B-206ENST00000549505 DDB2Q92466 427 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 GAFA1Q96PS6 74 aa8.3□□□□□ -1.08
RAB5B-206ENST00000549505 PARP12Q9H0J9 701 aaKnown RBP8.3□□□□□ -1.08
RAB5B-206ENST00000549505 UMAD1C9J7I0 102 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 C3orf80F5H4A9 247 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 SERPINE2P07093 398 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 KIR2DS2P43631 304 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 C17orf58Q2M2W7 97 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 SPRNQ5BIV9 151 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 CXorf66Q5JRM2 361 aaPredicted RBP8.29□□□□□ -1.08
RAB5B-206ENST00000549505 MEX3BQ6ZN04 569 aaKnown RBP8.29□□□□□ -1.08
RAB5B-206ENST00000549505 Q6ZRM9 215 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 TMED6Q8WW62 240 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 ITLN1Q8WWA0 313 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 BSCL2Q96G97 398 aaPredicted RBP8.29□□□□□ -1.08
RAB5B-206ENST00000549505 NARS2Q96I59 477 aaKnown RBP8.29□□□□□ -1.08
RAB5B-206ENST00000549505 TAS2R3Q9NYW6 316 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 SHISA9B4DS77 424 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 FABP1P07148 127 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 IL6RP08887 468 aaPredicted RBP8.29□□□□□ -1.08
RAB5B-206ENST00000549505 F2RL1P55085 397 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 MEF2CQ06413 473 aaPredicted RBP8.29□□□□□ -1.08
RAB5B-206ENST00000549505 CATR1Q13166 79 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 OR52E5Q8NH55 327 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 KAAG1Q9UBP8 84 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 PRELID3BQ9Y3B1 194 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 TMEM218A2RU14 115 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 FAM74A7A6NL05 159 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 A6NLC8 198 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 C17orf100A8MU93 164 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 MDKP21741 143 aaPredicted RBP8.29□□□□□ -1.08
RAB5B-206ENST00000549505 IL2RGP31785 369 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 SULT1A1P50225 295 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 TNFAIP6P98066 277 aaPredicted RBP8.29□□□□□ -1.08
RAB5B-206ENST00000549505 POU2AF1Q16633 256 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 VWC2Q2TAL6 325 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 FAM74A3Q4VXF1 159 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 TCF23Q7RTU1 214 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 OR51H1Q8NH63 302 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 RND1Q92730 232 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 ESRP2Q9H6T0 727 aaKnown RBP8.29□□□□□ -1.08
RAB5B-206ENST00000549505 NGBQ9NPG2 151 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 ASF1BQ9NVP2 202 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 FZR1Q9UM11 496 aa8.29□□□□□ -1.08
RAB5B-206ENST00000549505 TRAV1-1A0A0B4J248 108 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 ZNF729A6NN14 1252 aaPredicted RBP8.28□□□□□ -1.08
RAB5B-206ENST00000549505 ZG16O60844 167 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 RAB7AP51149 207 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 KLRB1Q12918 225 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 TMEM14EPQ6UXP3 125 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 MOGAT3Q86VF5 341 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 OR52L2PQ8NGH6 319 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 GNPNAT1Q96EK6 184 aaPredicted RBP8.28□□□□□ -1.08
RAB5B-206ENST00000549505 TMEM204Q9BSN7 226 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 OR14J1Q9UGF5 321 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 KNTC1P50748 2209 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 KBTBD11-OT1A0A1B0GTJ5 212 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 PROP1O75360 226 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 DFFBO76075 338 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 TNFRSF1AP19438 455 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 SPINK2P20155 84 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 BMP5P22003 454 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 LPAR6P43657 344 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 FAM71F2Q6NXP2 309 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 FGFRL1Q8N441 504 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 BPIFCQ8NFQ6 507 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 RBM14Q96PK6 669 aaKnown RBP8.28□□□□□ -1.08
RAB5B-206ENST00000549505 ATP5SQ99766 215 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 PSMG3Q9BT73 122 aaPredicted RBP8.28□□□□□ -1.08
RAB5B-206ENST00000549505 SEC11CQ9BY50 192 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 ZNF665Q9H7R5 613 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 NIT2Q9NQR4 276 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 CLN8Q9UBY8 286 aa8.28□□□□□ -1.08
RAB5B-206ENST00000549505 CHST1O43916 411 aa8.27□□□□□ -1.08
RAB5B-206ENST00000549505 FBXO24O75426 580 aa8.27□□□□□ -1.08
RAB5B-206ENST00000549505 MED6O75586 246 aa8.27□□□□□ -1.08
RAB5B-206ENST00000549505 OR8U9P0C7N5 309 aa8.27□□□□□ -1.08
RAB5B-206ENST00000549505 LOXP28300 417 aaPredicted RBP8.27□□□□□ -1.08
RAB5B-206ENST00000549505 DUTP33316 252 aaKnown RBP8.27□□□□□ -1.08
RAB5B-206ENST00000549505 RPL30P62888 115 aaKnown RBP8.27□□□□□ -1.08
RAB5B-206ENST00000549505 C9orf152Q5JTZ5 239 aa8.27□□□□□ -1.08
RAB5B-206ENST00000549505 OR8U1Q8NH10 309 aa8.27□□□□□ -1.08
RAB5B-206ENST00000549505 SPOCK3Q9BQ16 436 aa8.27□□□□□ -1.08
RAB5B-206ENST00000549505 IFI27L2Q9H2X8 130 aa8.27□□□□□ -1.08
RAB5B-206ENST00000549505 GFOD1Q9NXC2 390 aa8.27□□□□□ -1.08
RAB5B-206ENST00000549505 FRYQ5TBA9 3013 aa8.27□□□□□ -1.09
RAB5B-206ENST00000549505 BTBD17A6NE02 478 aa8.27□□□□□ -1.09
RAB5B-206ENST00000549505 SYNGR2O43760 224 aa8.27□□□□□ -1.09
RAB5B-206ENST00000549505 H2AFB1P0C5Y9 115 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms