RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 RNF150Q9ULK6 438 aa11.66□□□□□ -0.54
MSH2-206ENST00000543555 ZNF83P51522 516 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 RUNX1Q01196 453 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 TMEM267Q0VDI3 215 aaPredicted RBP11.65□□□□□ -0.54
MSH2-206ENST00000543555 MSMPQ1L6U9 139 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 KRBOX4Q5JUW0 171 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 OR2Z1Q8NG97 314 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 ABHD14AQ9BUJ0 271 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 PCNX1Q96RV3 2341 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 DFFBO76075 338 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 GLIPR1P48060 266 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 EIF2S3LQ2VIR3 472 aaKnown RBP11.65□□□□□ -0.54
MSH2-206ENST00000543555 HFEQ30201 348 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 TIMM23BQ5SRD1 257 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 C1orf185Q5T7R7 199 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 FAM122CQ6P4D5 195 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 NINJ1Q92982 152 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 S100PBPQ96BU1 408 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 C5orf30Q96GV9 206 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 PBDC1Q9BVG4 233 aa11.65□□□□□ -0.54
MSH2-206ENST00000543555 A0A1B0GV50 99 aa11.65□□□□□ -0.55
MSH2-206ENST00000543555 ATP6V1G2-DDX39BF2Z307 99 aa11.65□□□□□ -0.55
MSH2-206ENST00000543555 IAPPP10997 89 aa11.65□□□□□ -0.55
MSH2-206ENST00000543555 EIF4EBP1Q13541 118 aaPredicted RBP11.65□□□□□ -0.55
MSH2-206ENST00000543555 LRP11Q86VZ4 500 aa11.65□□□□□ -0.55
MSH2-206ENST00000543555 FGFRL1Q8N441 504 aa11.65□□□□□ -0.55
MSH2-206ENST00000543555 TPRX1Q8N7U7 411 aa11.65□□□□□ -0.55
MSH2-206ENST00000543555 DUSP13Q9UII6 198 aa11.65□□□□□ -0.55
MSH2-206ENST00000543555 M0R1B8 84 aa11.64□□□□□ -0.55
MSH2-206ENST00000543555 ALKBH2Q6NS38 261 aa11.64□□□□□ -0.55
MSH2-206ENST00000543555 CD177Q8N6Q3 437 aa11.64□□□□□ -0.55
MSH2-206ENST00000543555 RBMXL3Q8N7X1 1067 aaKnown RBP11.64□□□□□ -0.55
MSH2-206ENST00000543555 OR13A1Q8NGR1 328 aa11.64□□□□□ -0.55
MSH2-206ENST00000543555 LURAP1Q96LR2 239 aa11.64□□□□□ -0.55
MSH2-206ENST00000543555 MMP24Q9Y5R2 645 aa11.64□□□□□ -0.55
MSH2-206ENST00000543555 INTS1Q8N201 2190 aaKnown RBP11.64□□□□□ -0.55
MSH2-206ENST00000543555 A0A1B0GW64 132 aa11.64□□□□□ -0.55
MSH2-206ENST00000543555 SSTR5P35346 364 aa11.64□□□□□ -0.55
MSH2-206ENST00000543555 TAS2R30P59541 319 aa11.64□□□□□ -0.55
MSH2-206ENST00000543555 RPL30P62888 115 aaKnown RBP11.64□□□□□ -0.55
MSH2-206ENST00000543555 ZNF808Q8N4W9 903 aaPredicted RBP11.64□□□□□ -0.55
MSH2-206ENST00000543555 PSENENQ9NZ42 101 aa11.64□□□□□ -0.55
MSH2-206ENST00000543555 TP53TG5Q9Y2B4 290 aa11.64□□□□□ -0.55
MSH2-206ENST00000543555 FBXO7Q9Y3I1 522 aa11.64□□□□□ -0.55
MSH2-206ENST00000543555 GPR37O15354 613 aa11.63□□□□□ -0.55
MSH2-206ENST00000543555 RAMP3O60896 148 aa11.63□□□□□ -0.55
MSH2-206ENST00000543555 EGR1P18146 543 aa11.63□□□□□ -0.55
MSH2-206ENST00000543555 PRDX2P32119 198 aa11.63□□□□□ -0.55
MSH2-206ENST00000543555 PAX5Q02548 391 aa11.63□□□□□ -0.55
MSH2-206ENST00000543555 SPSB3Q6PJ21 355 aa11.63□□□□□ -0.55
MSH2-206ENST00000543555 COA4Q9NYJ1 87 aa11.63□□□□□ -0.55
MSH2-206ENST00000543555 PRR14LQ5THK1 2151 aa11.63□□□□□ -0.55
MSH2-206ENST00000543555 SRRM5B3KS81 715 aa11.63□□□□□ -0.55
MSH2-206ENST00000543555 H7C2Y5 167 aa11.63□□□□□ -0.55
MSH2-206ENST00000543555 CRYABP02511 175 aaKnown RBP11.63□□□□□ -0.55
MSH2-206ENST00000543555 CTRB1P17538 263 aa11.63□□□□□ -0.55
MSH2-206ENST00000543555 MSMO1Q15800 293 aa11.63□□□□□ -0.55
MSH2-206ENST00000543555 CTRB2Q6GPI1 263 aa11.63□□□□□ -0.55
MSH2-206ENST00000543555 GTF3C1Q12789 2109 aa11.63□□□□□ -0.55
MSH2-206ENST00000543555 FAM90A26D6RGX4 464 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 K7ENP7 123 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 IFNA5P01569 189 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 IGHV3-13P01766 116 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 TIMP3P35625 211 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 CATR1Q13166 79 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 OR2B11Q5JQS5 317 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 AKR1C8PQ5T2L2 129 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 UNQ6494/PRO21346Q6UXR6 183 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 OR10Z1Q8NGY1 313 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 KCNJ16Q9NPI9 418 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 BTBD17A6NE02 478 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 ZNF737O75373 536 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 CRYAAP02489 173 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 METTL15P1P0C7V9 234 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 CCL20P78556 96 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 TBR1Q16650 682 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 C3orf36Q3SXR2 165 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 SLC35B3Q9H1N7 401 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 ARL16Q0P5N6 197 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 SLC25A24Q6NUK1 477 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 TRAT1Q6PIZ9 186 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 ZCCHC14Q8WYQ9 949 aaKnown RBP11.62□□□□□ -0.55
MSH2-206ENST00000543555 MUCL1Q96DR8 90 aa11.62□□□□□ -0.55
MSH2-206ENST00000543555 KIAA2026Q5HYC2 2103 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 IGKV1D-17A0A075B6S4 117 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 IGHV3-43A0A0B4J1X8 118 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 C15orf65H3BRN8 121 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 P0C879 139 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 IGHV3-43DP0DP04 118 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 GLRXP35754 106 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 CFHR2P36980 270 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 UBE2KP61086 200 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 NKX6-1P78426 367 aaPredicted RBP11.61□□□□□ -0.55
MSH2-206ENST00000543555 FLI1Q01543 452 aaPredicted RBP11.61□□□□□ -0.55
MSH2-206ENST00000543555 ZNF816Q0VGE8 651 aaPredicted RBP11.61□□□□□ -0.55
MSH2-206ENST00000543555 EDDM3AQ14507 147 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 SP5Q6BEB4 398 aaPredicted RBP11.61□□□□□ -0.55
MSH2-206ENST00000543555 DPPA3Q6W0C5 159 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 HAPLN4Q86UW8 402 aa11.61□□□□□ -0.55
MSH2-206ENST00000543555 FAM90A1Q86YD7 464 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms