RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 B3GALT5-AS1P59052 145 aa20.09■□□□□ 0.81
SHD-201ENST00000543264 KCNIP4Q6PIL6 250 aa20.09■□□□□ 0.81
SHD-201ENST00000543264 TMEM256Q8N2U0 113 aa20.09■□□□□ 0.81
SHD-201ENST00000543264 PARD6GQ9BYG4 376 aaPredicted RBP20.09■□□□□ 0.81
SHD-201ENST00000543264 ESPL1Q14674 2120 aa20.09■□□□□ 0.81
SHD-201ENST00000543264 C1QTNF9BB2RNN3 333 aa20.09■□□□□ 0.81
SHD-201ENST00000543264 C1orf194Q5T5A4 169 aa20.09■□□□□ 0.81
SHD-201ENST00000543264 GGNQ86UU5 652 aa20.09■□□□□ 0.81
SHD-201ENST00000543264 ZNF552Q9H707 407 aaPredicted RBP20.09■□□□□ 0.81
SHD-201ENST00000543264 A0A096LPE4 126 aa20.08■□□□□ 0.81
SHD-201ENST00000543264 IGHV1-45A0A0A0MS14 117 aa20.08■□□□□ 0.81
SHD-201ENST00000543264 A0A1W2PPZ6 126 aa20.08■□□□□ 0.81
SHD-201ENST00000543264 C5orf49A4QMS7 147 aa20.08■□□□□ 0.81
SHD-201ENST00000543264 TYMSP04818 313 aa20.08■□□□□ 0.81
SHD-201ENST00000543264 TDGF1P3P51864 188 aa20.08■□□□□ 0.81
SHD-201ENST00000543264 RPS16P62249 146 aaKnown RBP20.08■□□□□ 0.81
SHD-201ENST00000543264 COLCA1Q6ZS62 124 aa20.08■□□□□ 0.81
SHD-201ENST00000543264 ABHD3Q8WU67 409 aa20.08■□□□□ 0.81
SHD-201ENST00000543264 OCIAD1Q9NX40 245 aa20.08■□□□□ 0.81
SHD-201ENST00000543264 TRAPPC1Q9Y5R8 145 aa20.08■□□□□ 0.81
SHD-201ENST00000543264 FREM1Q5H8C1 2179 aa20.08■□□□□ 0.81
SHD-201ENST00000543264 A0A0G2JMM0 328 aa20.08■□□□□ 0.8
SHD-201ENST00000543264 A0A0U1RQK1 487 aa20.08■□□□□ 0.8
SHD-201ENST00000543264 A0A1W2PPB8 328 aa20.08■□□□□ 0.8
SHD-201ENST00000543264 A0A1W2PRS3 328 aa20.08■□□□□ 0.8
SHD-201ENST00000543264 ZNF320A2RRD8 509 aa20.08■□□□□ 0.8
SHD-201ENST00000543264 KIR3DP1A8MWS1 328 aa20.08■□□□□ 0.8
SHD-201ENST00000543264 PDGFBP01127 241 aaPredicted RBP20.08■□□□□ 0.8
SHD-201ENST00000543264 DEFA4P12838 97 aa20.08■□□□□ 0.8
SHD-201ENST00000543264 IL3RAP26951 378 aa20.08■□□□□ 0.8
SHD-201ENST00000543264 WNT5AP41221 380 aa20.08■□□□□ 0.8
SHD-201ENST00000543264 OR10D3Q8NH80 312 aa20.08■□□□□ 0.8
SHD-201ENST00000543264 CCDC74BQ96LY2 380 aa20.08■□□□□ 0.8
SHD-201ENST00000543264 NAGKQ9UJ70 344 aa20.08■□□□□ 0.8
SHD-201ENST00000543264 TIMM9Q9Y5J7 89 aa20.08■□□□□ 0.8
SHD-201ENST00000543264 ZNF705FA8MVS1 300 aaPredicted RBP20.07■□□□□ 0.8
SHD-201ENST00000543264 DNPH1O43598 174 aa20.07■□□□□ 0.8
SHD-201ENST00000543264 ZNF705DP0CH99 300 aaPredicted RBP20.07■□□□□ 0.8
SHD-201ENST00000543264 ZNF705BP0CI00 300 aaPredicted RBP20.07■□□□□ 0.8
SHD-201ENST00000543264 RPL29P47914 159 aaKnown RBP20.07■□□□□ 0.8
SHD-201ENST00000543264 FFAR4Q5NUL3 377 aa20.07■□□□□ 0.8
SHD-201ENST00000543264 BTNL3Q6UXE8 466 aa20.07■□□□□ 0.8
SHD-201ENST00000543264 RPS19BP1Q86WX3 136 aaKnown RBP20.07■□□□□ 0.8
SHD-201ENST00000543264 NEIL1Q96FI4 390 aaPredicted RBP20.07■□□□□ 0.8
SHD-201ENST00000543264 MANBALQ9NQG1 85 aa20.07■□□□□ 0.8
SHD-201ENST00000543264 NUPR1O60356 82 aa20.07■□□□□ 0.8
SHD-201ENST00000543264 EGR1P18146 543 aa20.07■□□□□ 0.8
SHD-201ENST00000543264 RIPPLY2Q5TAB7 128 aa20.07■□□□□ 0.8
SHD-201ENST00000543264 FGFRL1Q8N441 504 aa20.07■□□□□ 0.8
SHD-201ENST00000543264 IMMP1LQ96LU5 166 aa20.07■□□□□ 0.8
SHD-201ENST00000543264 CST9LP1Q5W188 147 aa20.06■□□□□ 0.8
SHD-201ENST00000543264 TMEM14EPQ6UXP3 125 aa20.06■□□□□ 0.8
SHD-201ENST00000543264 STRADBQ9C0K7 418 aa20.06■□□□□ 0.8
SHD-201ENST00000543264 DLL3Q9NYJ7 618 aa20.06■□□□□ 0.8
SHD-201ENST00000543264 LILRA1O75019 489 aa20.06■□□□□ 0.8
SHD-201ENST00000543264 TRAPPC6AO75865 159 aa20.06■□□□□ 0.8
SHD-201ENST00000543264 NPPCP23582 126 aa20.06■□□□□ 0.8
SHD-201ENST00000543264 ZNF705AQ6ZN79 300 aaPredicted RBP20.06■□□□□ 0.8
SHD-201ENST00000543264 MS4A10Q96PG2 267 aa20.06■□□□□ 0.8
SHD-201ENST00000543264 RBM14Q96PK6 669 aaKnown RBP20.06■□□□□ 0.8
SHD-201ENST00000543264 LIN7CQ9NUP9 197 aaKnown RBP20.06■□□□□ 0.8
SHD-201ENST00000543264 RAB4AP20338 218 aa20.05■□□□□ 0.8
SHD-201ENST00000543264 BMP5P22003 454 aa20.05■□□□□ 0.8
SHD-201ENST00000543264 SH2D2AQ9NP31 389 aa20.05■□□□□ 0.8
SHD-201ENST00000543264 CEP192Q8TEP8 1941 aa20.05■□□□□ 0.8
SHD-201ENST00000543264 LRP5LA4QPB2 252 aa20.05■□□□□ 0.8
SHD-201ENST00000543264 RFPL3SP0C7P2 107 aa20.05■□□□□ 0.8
SHD-201ENST00000543264 LRP11Q86VZ4 500 aa20.05■□□□□ 0.8
SHD-201ENST00000543264 IL17BQ9UHF5 180 aa20.05■□□□□ 0.8
SHD-201ENST00000543264 TRBV6-6A0A0A6YYG2 114 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 NGFP01138 241 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 UMODP07911 640 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 COX6A1P12074 109 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 CD33P20138 364 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 GCH1P30793 250 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 WIPI1Q5MNZ9 446 aaPredicted RBP20.04■□□□□ 0.8
SHD-201ENST00000543264 PRRG4Q9BZD6 226 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 DCAF16Q9NXF7 216 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 LOC102723996A0A087X1L8 192 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 TMEM210A6NLX4 147 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 C11orf94C9JXX5 98 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 DEGS1O15121 323 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 VENTXO95231 258 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 CRYAAP02489 173 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 OR10J1P30954 320 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 RPL15P61313 204 aaKnown RBP20.04■□□□□ 0.8
SHD-201ENST00000543264 ARF1P84077 181 aaKnown RBP20.04■□□□□ 0.8
SHD-201ENST00000543264 TFF3Q07654 80 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 FAM58AQ8N1B3 248 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 TBX15Q96SF7 602 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 CLN8Q9UBY8 286 aa20.04■□□□□ 0.8
SHD-201ENST00000543264 NCKAP5O14513 1909 aa20.03■□□□□ 0.8
SHD-201ENST00000543264 MPLP40238 635 aa20.03■□□□□ 0.8
SHD-201ENST00000543264 LCN2P80188 198 aa20.03■□□□□ 0.8
SHD-201ENST00000543264 IGFBP7Q16270 282 aa20.03■□□□□ 0.8
SHD-201ENST00000543264 OR5A2Q8NGI9 324 aa20.03■□□□□ 0.8
SHD-201ENST00000543264 KCNE4Q8WWG9 221 aa20.03■□□□□ 0.8
SHD-201ENST00000543264 KIR2DL5BA0A0G2JN68 375 aa20.03■□□□□ 0.8
SHD-201ENST00000543264 KIR2DL5BA0A0G2JPC4 375 aa20.03■□□□□ 0.8
SHD-201ENST00000543264 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms