RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 KIR3DP1A8MWS1 328 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 ZNF732B4DXR9 585 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 TMEM250H0YL14 139 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 K7EQM0 130 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 TAX1BP3O14907 124 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 PIN1P1O15428 100 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 GNG7O60262 68 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 ZNF217O75362 1048 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 PITX3O75364 302 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 SLC2A10O95528 541 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 SMIM10L1P0DMW3 83 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 IRF1P10914 325 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 GCH1P30793 250 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 PPP1CCP36873 323 aaKnown RBP4.91□□□□□ -1.62
XRCC4-206ENST00000542685 REG1BP48304 166 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 SGSHP51688 502 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 PLP1P60201 277 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 RHOBP62745 196 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 POLR2LP62875 67 aaKnown RBP4.91□□□□□ -1.62
XRCC4-206ENST00000542685 FKBP1BP68106 108 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 MFGE8Q08431 387 aaPredicted RBP4.91□□□□□ -1.62
XRCC4-206ENST00000542685 HSD52Q0P140 79 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 SRSF6Q13247 344 aaKnown RBP4.91□□□□□ -1.62
XRCC4-206ENST00000542685 PDGFRLQ15198 375 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 MSMO1Q15800 293 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 PCK2Q16822 640 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 LTC4SQ16873 150 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 HLA-BQ31612 363 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 CARD17Q5XLA6 110 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 RTL6Q6ICC9 239 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 FAM166AQ6J272 317 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.91□□□□□ -1.62
XRCC4-206ENST00000542685 UFSP1Q6NVU6 142 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 FIGLAQ6QHK4 219 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 FA2HQ7L5A8 372 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 FAM219AQ8IW50 185 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 SLC35F2Q8IXU6 374 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 ZNF595Q8IYB9 648 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 OR2L13Q8N349 312 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 CSNK1A1LQ8N752 337 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 ZNF433Q8N7K0 673 aaPredicted RBP4.91□□□□□ -1.62
XRCC4-206ENST00000542685 OR1N2Q8NGR9 330 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 FNDC9Q8TBE3 224 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 RLN3Q8WXF3 142 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 SMIM10Q96HG1 83 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 SLC35G5Q96KT7 338 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 DUX5Q96PT3 197 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 GPA33Q99795 319 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 PMCHL2Q9BQD1 86 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 RSG1Q9BU20 258 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 NPFFR1Q9GZQ6 430 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 LPAR5Q9H1C0 372 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 GEMIN7Q9H840 131 aaKnown RBP4.91□□□□□ -1.62
XRCC4-206ENST00000542685 YAE1D1Q9NRH1 226 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 AK3Q9UIJ7 227 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 MMP17Q9ULZ9 603 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 PXMP4Q9Y6I8 212 aa4.91□□□□□ -1.62
XRCC4-206ENST00000542685 SCN5AQ14524 2016 aa4.9□□□□□ -1.62
XRCC4-206ENST00000542685 DOCK7Q96N67 2140 aa4.9□□□□□ -1.62
XRCC4-206ENST00000542685 IGLV5-52A0A0A0MRZ9 124 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 PIGBOS1A0A0B4J2F0 54 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 A0A1W2PR80 420 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 TMEM213A2RRL7 107 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 PGPEP1LA6NFU8 196 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 SERINC4A6NH21 518 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 C17orf100A8MU93 164 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 HS3ST1O14792 307 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 ZNF207O43670 478 aaKnown RBP4.9□□□□□ -1.63
XRCC4-206ENST00000542685 KBTBD11O94819 623 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 GAS8-AS1O95177 125 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 C1orf105O95561 183 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 EPPINO95925 133 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 SERPINA7P05543 415 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 BCL2P10415 239 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 MMP9P14780 707 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 KLK2P20151 261 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 PSMB5P28074 263 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 SRD5A2P31213 254 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 CD52P31358 61 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 BSGP35613 385 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 TAS2R30P59541 319 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 ZFP36L1Q07352 338 aaKnown RBP4.9□□□□□ -1.63
XRCC4-206ENST00000542685 AESQ08117 197 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 ADIRFQ15847 76 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 MPV17LQ2QL34 196 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 TDRG1Q3Y452 100 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 ZNF672Q499Z4 452 aaPredicted RBP4.9□□□□□ -1.63
XRCC4-206ENST00000542685 CLLU1OSQ5K130 101 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 C22orf39Q6P5X5 142 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 TMEM182Q6ZP80 229 aaPredicted RBP4.9□□□□□ -1.63
XRCC4-206ENST00000542685 FOXI2Q6ZQN5 318 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 RTN4RL2Q86UN3 420 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.9□□□□□ -1.63
XRCC4-206ENST00000542685 TUSC5Q8IXB3 177 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 LGI3Q8N145 548 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 SIGLECL1Q8N7X8 197 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 ZIC4Q8N9L1 334 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 OR1B1Q8NGR6 318 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 OR13C9Q8NGT0 318 aa4.9□□□□□ -1.63
XRCC4-206ENST00000542685 OR8S1Q8NH09 359 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms