RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 CRYAAP02489 173 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 IGHV1-2P23083 117 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 ID3Q02535 119 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 ICAM4Q14773 271 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 TMEM56Q96MV1 263 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 ATP5SQ99766 215 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 STRAPQ9Y3F4 350 aaKnown RBP11.44□□□□□ -0.58
PTPN1-202ENST00000541713 TMEM56-RWDD3S4R434 201 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 ZG16O60844 167 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 PITX3O75364 302 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 S1PR2O95136 353 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 SELLP14151 372 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 UCP3P55916 312 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 SRPXP78539 464 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 GCSAMLQ5JQS6 135 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 OR51I2Q9H344 312 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 SLC39A9Q9NUM3 307 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 IL36GQ9NZH8 169 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 KCNIP1Q9NZI2 227 aa11.44□□□□□ -0.58
PTPN1-202ENST00000541713 KLF13Q9Y2Y9 288 aaPredicted RBP11.44□□□□□ -0.58
PTPN1-202ENST00000541713 C17orf98A8MV24 154 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 CLN5O75503 358 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 IFNA17P01571 189 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 SRP19P09132 144 aaKnown RBP11.43□□□□□ -0.58
PTPN1-202ENST00000541713 SPNS3Q6ZMD2 512 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 LRTM2Q8N967 370 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 OR2Z1Q8NG97 314 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 OPN3Q9H1Y3 402 aaPredicted RBP11.43□□□□□ -0.58
PTPN1-202ENST00000541713 HAND1O96004 215 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 SP9P0CG40 484 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 CD200P41217 278 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 TLE4Q04727 773 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 DEFB109BQ30KR1 87 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 KLF14Q8TD94 323 aaPredicted RBP11.43□□□□□ -0.58
PTPN1-202ENST00000541713 GNG12Q9UBI6 72 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 CSMD1Q96PZ7 3565 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 SH2D1BO14796 132 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 RAC2P15153 192 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 ZNF83P51522 516 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 Q6ZR03 302 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 CCDC54Q8NEL0 328 aa11.43□□□□□ -0.58
PTPN1-202ENST00000541713 BCL2L2Q92843 193 aaPredicted RBP11.43□□□□□ -0.58
PTPN1-202ENST00000541713 PRSS44E7EML9 344 aa11.42□□□□□ -0.58
PTPN1-202ENST00000541713 H0Y980 276 aa11.42□□□□□ -0.58
PTPN1-202ENST00000541713 J3QT63 122 aa11.42□□□□□ -0.58
PTPN1-202ENST00000541713 OR8U8P0C7N1 319 aa11.42□□□□□ -0.58
PTPN1-202ENST00000541713 ZNF585BQ52M93 769 aa11.42□□□□□ -0.58
PTPN1-202ENST00000541713 GPR61Q9BZJ8 451 aa11.42□□□□□ -0.58
PTPN1-202ENST00000541713 RBKSQ9H477 322 aa11.42□□□□□ -0.58
PTPN1-202ENST00000541713 GAB2Q9UQC2 676 aa11.42□□□□□ -0.58
PTPN1-202ENST00000541713 LRBAP50851 2863 aa11.42□□□□□ -0.58
PTPN1-202ENST00000541713 C12orf77C9JDV5 145 aa11.42□□□□□ -0.58
PTPN1-202ENST00000541713 FABP1P07148 127 aa11.42□□□□□ -0.58
PTPN1-202ENST00000541713 UCP2P55851 309 aa11.42□□□□□ -0.58
PTPN1-202ENST00000541713 SLC38A11Q08AI6 406 aa11.42□□□□□ -0.58
PTPN1-202ENST00000541713 HAPLN4Q86UW8 402 aa11.42□□□□□ -0.58
PTPN1-202ENST00000541713 LRP11Q86VZ4 500 aa11.42□□□□□ -0.58
PTPN1-202ENST00000541713 OR10D4PQ8NGN7 298 aa11.42□□□□□ -0.58
PTPN1-202ENST00000541713 ASH1LQ9NR48 2969 aaKnown RBP11.42□□□□□ -0.58
PTPN1-202ENST00000541713 SMPD2O60906 423 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 HBZP02008 142 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 S100PP25815 95 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 TAS2R30P59541 319 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 TFF3Q07654 80 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 UTF1Q5T230 341 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 H1FOOQ8IZA3 346 aaPredicted RBP11.41□□□□□ -0.58
PTPN1-202ENST00000541713 ZNRF1Q8ND25 227 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 PRO3102Q9H379 93 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 SVEP1Q4LDE5 3571 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 IGKV3D-15A0A087WSY6 115 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 MAP1LC3B2A6NCE7 125 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 SPRY3O43610 288 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 PTBP3O95758 552 aaKnown RBP11.41□□□□□ -0.58
PTPN1-202ENST00000541713 WT1P19544 449 aaPredicted RBP11.41□□□□□ -0.58
PTPN1-202ENST00000541713 MRPL49Q13405 166 aaKnown RBP11.41□□□□□ -0.58
PTPN1-202ENST00000541713 CST9LP1Q5W188 147 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 FAM185AQ8N0U4 392 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 ZNF295-AS1Q8N0V1 137 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 NANOS1Q8WY41 292 aaKnown RBP11.41□□□□□ -0.58
PTPN1-202ENST00000541713 SNX22Q96L94 193 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 MAP1LC3BQ9GZQ8 125 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 OPA3Q9H6K4 179 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 PATZ1Q9HBE1 687 aaKnown RBP11.41□□□□□ -0.58
PTPN1-202ENST00000541713 RNF115Q9Y4L5 304 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 PGPEP1LA6NFU8 196 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 FCGR3BO75015 233 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 RNPS1Q15287 305 aaKnown RBP11.41□□□□□ -0.58
PTPN1-202ENST00000541713 RHEBQ15382 184 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 ZNF726P1Q15940 193 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 ZCCHC24Q8N2G6 241 aaKnown RBP11.41□□□□□ -0.58
PTPN1-202ENST00000541713 RPRMLQ8N4K4 120 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 OR5D13Q8NGL4 314 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 OR4F5Q8NH21 305 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 TMEM45BQ96B21 275 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 GALMQ96C23 342 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 GNPNAT1Q96EK6 184 aaPredicted RBP11.41□□□□□ -0.58
PTPN1-202ENST00000541713 RCC1LQ96I51 464 aaKnown RBP11.41□□□□□ -0.58
PTPN1-202ENST00000541713 FER1L6-AS2Q96M78 137 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 OR4F4Q96R69 305 aa11.41□□□□□ -0.58
PTPN1-202ENST00000541713 PRO1933Q9H354 126 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms