RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 GMPPAQ96IJ6 420 aaPredicted RBP10.58□□□□□ -0.72
RNF4-222ENST00000541204 GPR61Q9BZJ8 451 aa10.58□□□□□ -0.72
RNF4-222ENST00000541204 TNRC6AQ8NDV7 1962 aaKnown RBP10.57□□□□□ -0.72
RNF4-222ENST00000541204 CEP250Q9BV73 2442 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 SYNGR2O43760 224 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 IGLV2-14P01704 120 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 BCL2P10415 239 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 ZNF16P17020 682 aaPredicted RBP10.57□□□□□ -0.72
RNF4-222ENST00000541204 NKX6-1P78426 367 aaPredicted RBP10.57□□□□□ -0.72
RNF4-222ENST00000541204 VWA1Q6PCB0 445 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 OR10V1Q8NGI7 309 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 RIMS4Q9H426 269 aaPredicted RBP10.57□□□□□ -0.72
RNF4-222ENST00000541204 DLL3Q9NYJ7 618 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 PSENENQ9NZ42 101 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 CISD1Q9NZ45 108 aaKnown RBP10.57□□□□□ -0.72
RNF4-222ENST00000541204 ZNF318Q5VUA4 2279 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 TRGC1P0CF51 173 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 C4orf17Q53FE4 359 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 FAM58AQ8N1B3 248 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 OR10G4Q8NGN3 311 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 ABHD5Q8WTS1 349 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 FRZBQ92765 325 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 FAM210BQ96KR6 192 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 PFDN5Q99471 154 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 CDH20Q9HBT6 801 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 FZR1Q9UM11 496 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 PTPRZ1P23471 2315 aaPredicted RBP10.57□□□□□ -0.72
RNF4-222ENST00000541204 ESPL1Q14674 2120 aa10.57□□□□□ -0.72
RNF4-222ENST00000541204 CHD3Q12873 2000 aaKnown RBP10.56□□□□□ -0.72
RNF4-222ENST00000541204 B4DEV8 164 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 SEC14L6B5MCN3 397 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 PPP1R2P9O14990 202 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 IGKV1-5P01602 117 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 SLC25A6P12236 298 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 GNG3P63215 75 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 FOXF2Q12947 444 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 HAPLN4Q86UW8 402 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 CXorf67Q86X51 503 aaPredicted RBP10.56□□□□□ -0.72
RNF4-222ENST00000541204 ZNF525Q8N782 197 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 GTF3AQ92664 365 aaKnown RBP10.56□□□□□ -0.72
RNF4-222ENST00000541204 PLK3Q9H4B4 646 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 OR14J1Q9UGF5 321 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 GRPP07492 148 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 CD82P27701 267 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 PLA2G5P39877 138 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 PPP1CBP62140 327 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 HNF4GQ14541 408 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 ZNF880Q6PDB4 577 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 FAM214BQ7L5A3 538 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 ZNF573Q86YE8 665 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 HIST3H2BBQ8N257 126 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 C9orf106Q8NAJ2 232 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 CA5BP1Q8WTZ4 195 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 RCC1LQ96I51 464 aaKnown RBP10.56□□□□□ -0.72
RNF4-222ENST00000541204 SSX3Q99909 188 aa10.56□□□□□ -0.72
RNF4-222ENST00000541204 RBM7Q9Y580 266 aaKnown RBP10.56□□□□□ -0.72
RNF4-222ENST00000541204 TRBV6-6A0A0A6YYG2 114 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 ZNF729A6NN14 1252 aaPredicted RBP10.55□□□□□ -0.72
RNF4-222ENST00000541204 SIRPB1O00241 398 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 SMPD2O60906 423 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 ELLP55199 621 aaPredicted RBP10.55□□□□□ -0.72
RNF4-222ENST00000541204 TGFBR3Q03167 851 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 TESK1Q15569 626 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 WDR86Q86TI4 376 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 C1orf87Q8N0U7 546 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 LILRB2Q8N423 598 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 SLC25A40Q8TBP6 338 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 CABLES2Q9BTV7 478 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 CLCF1Q9UBD9 225 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 KCNS2Q9ULS6 477 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 CEBPZOSA8MTT3 80 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 CLDN34H7C241 214 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 CDIPTO14735 213 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 DEGS1O15121 323 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 CYB5R3P00387 301 aaPredicted RBP10.55□□□□□ -0.72
RNF4-222ENST00000541204 MDKP21741 143 aaPredicted RBP10.55□□□□□ -0.72
RNF4-222ENST00000541204 SPANXN5Q5MJ07 72 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 LINC00596Q86U02 117 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 OR13D1Q8NGV5 346 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 MBD3L1Q8WWY6 194 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 TREM2Q9NZC2 230 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 MPC1Q9Y5U8 109 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 ATMQ13315 3056 aa10.55□□□□□ -0.72
RNF4-222ENST00000541204 WDR1O75083 606 aa10.54□□□□□ -0.72
RNF4-222ENST00000541204 MDH2P40926 338 aaKnown RBP10.54□□□□□ -0.72
RNF4-222ENST00000541204 TLE1Q04724 770 aa10.54□□□□□ -0.72
RNF4-222ENST00000541204 PNRC1Q12796 327 aaPredicted RBP10.54□□□□□ -0.72
RNF4-222ENST00000541204 LRRC75BQ2VPJ9 315 aa10.54□□□□□ -0.72
RNF4-222ENST00000541204 ZNF585BQ52M93 769 aa10.54□□□□□ -0.72
RNF4-222ENST00000541204 BEND4Q6ZU67 534 aa10.54□□□□□ -0.72
RNF4-222ENST00000541204 SDF2L1Q9HCN8 221 aa10.54□□□□□ -0.72
RNF4-222ENST00000541204 TRAV17A0A0B4J275 112 aa10.54□□□□□ -0.72
RNF4-222ENST00000541204 FABP4P15090 132 aa10.54□□□□□ -0.72
RNF4-222ENST00000541204 LSM10Q969L4 123 aaKnown RBP10.54□□□□□ -0.72
RNF4-222ENST00000541204 OR51I2Q9H344 312 aa10.54□□□□□ -0.72
RNF4-222ENST00000541204 RBKSQ9H477 322 aa10.54□□□□□ -0.72
RNF4-222ENST00000541204 GP6Q9HCN6 339 aa10.54□□□□□ -0.72
RNF4-222ENST00000541204 DMXL2Q8TDJ6 3036 aa10.54□□□□□ -0.72
RNF4-222ENST00000541204 DCHS1Q96JQ0 3298 aa10.54□□□□□ -0.72
RNF4-222ENST00000541204 NDUFS6O75380 124 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms