RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 IL36RNQ9UBH0 155 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 HKR1P10072 659 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 CTSSP25774 331 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 CD69Q07108 199 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 ZNF415Q09FC8 603 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 MRPL30Q8TCC3 161 aaKnown RBP8.74□□□□□ -1.01
TRERF1-205ENST00000541110 MYEOVQ96EZ4 313 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 SLC25A37Q9NYZ2 338 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 TRGV3P03979 118 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 ZNF25P17030 456 aaPredicted RBP8.74□□□□□ -1.01
TRERF1-205ENST00000541110 PSG9Q00887 426 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 DPPA3Q6W0C5 159 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 FAM168AQ92567 244 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 ZNF831Q5JPB2 1677 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 C7orf71A4D174 169 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 FOXH1O75593 365 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 OR2A4O95047 310 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 IL24Q13007 206 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 MBNL2Q5VZF2 373 aaKnown RBP8.74□□□□□ -1.01
TRERF1-205ENST00000541110 OR10AC1Q8NH08 325 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 OR2A7Q96R45 310 aa8.74□□□□□ -1.01
TRERF1-205ENST00000541110 HOXA3O43365 443 aaPredicted RBP8.73□□□□□ -1.01
TRERF1-205ENST00000541110 BSXQ3C1V8 233 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 YIPF6Q96EC8 236 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 SCNM1Q9BWG6 230 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 CCL28Q9NRJ3 127 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 F11RQ9Y624 299 aaKnown RBP8.73□□□□□ -1.01
TRERF1-205ENST00000541110 CTAG2O75638 210 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 CDS2O95674 445 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 MBPP02686 304 aaPredicted RBP8.73□□□□□ -1.01
TRERF1-205ENST00000541110 HOXD4P09016 255 aaPredicted RBP8.73□□□□□ -1.01
TRERF1-205ENST00000541110 CDKN2AP42771 156 aaKnown RBP8.73□□□□□ -1.01
TRERF1-205ENST00000541110 KIR2DL4Q99706 377 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 FUT9Q9Y231 359 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 SEC16AO15027 2179 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 HOXB3P14651 431 aaPredicted RBP8.73□□□□□ -1.01
TRERF1-205ENST00000541110 LINC00596Q86U02 117 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 TMEM183AQ8IXX5 376 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 FRRS1LQ9P0K9 344 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 NPPCP23582 126 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 DHRS2Q13268 280 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 ZNF324BQ6AW86 544 aaPredicted RBP8.73□□□□□ -1.01
TRERF1-205ENST00000541110 PRSS54Q6PEW0 395 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 MRGPRGQ86SM5 289 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 IGHV3-49A0A0A0MS15 119 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 IGHV3-35A0A0C4DH35 117 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 VDAC2P45880 294 aaPredicted RBP8.73□□□□□ -1.01
TRERF1-205ENST00000541110 UCP2P55851 309 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 PRELID3AQ96N28 172 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 AANATQ16613 207 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 ITLN1Q8WWA0 313 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 SLC52A3Q9NQ40 469 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 ASB1Q9Y576 335 aa8.73□□□□□ -1.01
TRERF1-205ENST00000541110 IL4P05112 153 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 SAA1P0DJI8 122 aaPredicted RBP8.72□□□□□ -1.01
TRERF1-205ENST00000541110 EGR1P18146 543 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 UQCC3Q6UW78 93 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 COL11A1P12107 1806 aaPredicted RBP8.72□□□□□ -1.01
TRERF1-205ENST00000541110 TRBV7-9A0A0J9YWB2 115 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 SELENOTP62341 195 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 ACVR1Q04771 509 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 FAM209BQ5JX69 171 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 C11orf44Q8N8P7 122 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 VAX2Q9UIW0 290 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 CXCL10P02778 98 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 CD1AP06126 327 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 MC5RP33032 325 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 INSL4Q14641 139 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 MRPL24Q96A35 216 aaKnown RBP8.72□□□□□ -1.01
TRERF1-205ENST00000541110 SF3B5Q9BWJ5 86 aaKnown RBP8.72□□□□□ -1.01
TRERF1-205ENST00000541110 DUSP15Q9H1R2 295 aaPredicted RBP8.72□□□□□ -1.01
TRERF1-205ENST00000541110 SIGLEC7Q9Y286 467 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 DDX60LQ5H9U9 1706 aaKnown RBP8.72□□□□□ -1.01
TRERF1-205ENST00000541110 ARRDC5A6NEK1 342 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 IGLV3-27P01718 113 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 MMP9P14780 707 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 NUBPLQ8TB37 319 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 LSM10Q969L4 123 aaKnown RBP8.72□□□□□ -1.01
TRERF1-205ENST00000541110 JMJD8Q96S16 334 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 FGF20Q9NP95 211 aaPredicted RBP8.72□□□□□ -1.01
TRERF1-205ENST00000541110 SLC17A5Q9NRA2 495 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 HSF4Q9ULV5 492 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 MAP1BP46821 2468 aaKnown RBP8.72□□□□□ -1.01
TRERF1-205ENST00000541110 NACAE9PAV3 2078 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 AHRRA9YTQ3 701 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 SOCS1O15524 211 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 GDF9O60383 454 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 ITGBL1O95965 494 aaPredicted RBP8.72□□□□□ -1.01
TRERF1-205ENST00000541110 CT62P0C5K7 136 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.72□□□□□ -1.01
TRERF1-205ENST00000541110 RBMY1BA6NDE4 496 aaKnown RBP8.72□□□□□ -1.01
TRERF1-205ENST00000541110 RBMY1EA6NEQ0 496 aaKnown RBP8.72□□□□□ -1.01
TRERF1-205ENST00000541110 RBMY1DP0C7P1 496 aaKnown RBP8.72□□□□□ -1.01
TRERF1-205ENST00000541110 RBMY1A1P0DJD3 496 aaKnown RBP8.72□□□□□ -1.01
TRERF1-205ENST00000541110 RBMY1CP0DJD4 496 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 IGFBP6P24592 240 aaPredicted RBP8.72□□□□□ -1.01
TRERF1-205ENST00000541110 ZNF488Q96MN9 340 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 TLNRD1Q9H1K6 362 aa8.72□□□□□ -1.01
TRERF1-205ENST00000541110 TMEM127O75204 238 aa8.71□□□□□ -1.01
TRERF1-205ENST00000541110 CLEC18BQ6UXF7 455 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms