RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 HIST1H2BKO60814 126 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 HIST1H2BJP06899 126 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 HIST1H2BOP23527 126 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 HIST1H2BBP33778 126 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 MAS1LP35410 378 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 HIST1H2BDP58876 126 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 HIST1H2BCP62807 126 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 HIST2H2BEQ16778 126 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.97□□□□□ -1.61
CSMD1-215ENST00000537824 ANKRD37Q7Z713 158 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 ORAOV1Q8WV07 137 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 HIST1H2BHQ93079 126 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 HIST1H2BNQ99877 126 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 HIST1H2BMQ99879 126 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 TPSD1Q9BZJ3 242 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 NPTNQ9Y639 398 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 C1QTNF9BB2RNN3 333 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 VDAC1P21796 283 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 CCR5P51681 352 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 SLC52A3Q9NQ40 469 aa4.97□□□□□ -1.61
CSMD1-215ENST00000537824 A0A1W2PPC4 97 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 PRSS2P07478 247 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 ZNF708P17019 499 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 DUSP2Q05923 314 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 ZNF260Q3ZCT1 412 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 KRTCAP3Q53RY4 240 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 CNRIP1Q96F85 164 aaPredicted RBP4.96□□□□□ -1.61
CSMD1-215ENST00000537824 IP6K3Q96PC2 410 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 AGAP20933 346 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 ALKBH6Q3KRA9 238 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 ALKAL1Q6UXT8 129 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 HTR3DQ70Z44 454 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 LYG1Q8N1E2 194 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 OR2V1Q8NHB1 315 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 APOBEC3DQ96AK3 386 aaPredicted RBP4.96□□□□□ -1.61
CSMD1-215ENST00000537824 SNRNP40Q96DI7 357 aaKnown RBP4.96□□□□□ -1.61
CSMD1-215ENST00000537824 RTN4RQ9BZR6 473 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 A0A0G2JMZ2 1700 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 LRRC37A2A6NM11 1700 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 LRRC37AA6NMS7 1700 aa4.96□□□□□ -1.61
CSMD1-215ENST00000537824 TNFSF11O14788 317 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 OR2A4O95047 310 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 UCP3P55916 312 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 SERF2P84101 59 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 ZNF766Q5HY98 468 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 CA13Q8N1Q1 262 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 OR2A7Q96R45 310 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 TMEM70Q9BUB7 260 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 ASCL3Q9NQ33 180 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 TAAR3PQ9P1P4 343 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 SELENOKQ9Y6D0 94 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 MPZL1O95297 269 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 C8orf82Q6P1X6 216 aaPredicted RBP4.96□□□□□ -1.62
CSMD1-215ENST00000537824 ALKBH3Q96Q83 286 aaPredicted RBP4.96□□□□□ -1.62
CSMD1-215ENST00000537824 SDHCQ99643 169 aaPredicted RBP4.96□□□□□ -1.62
CSMD1-215ENST00000537824 DNAJB12Q9NXW2 375 aaKnown RBP4.96□□□□□ -1.62
CSMD1-215ENST00000537824 THYN1Q9P016 225 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 ADAMTSL3P82987 1691 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 ZSWIM8A7E2V4 1837 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 A0A1W2PRD5 423 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 A0A1W2PRF3 423 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 A0A1W2PRM7 423 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 hADV38S2A0JD32 116 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 FTH1P19P0C7X4 201 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 NPEPL1Q8NDH3 523 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 Q8WTZ3 238 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 FGF14Q92915 247 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 MRGPRX4Q96LA9 322 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 PPYP01298 95 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 HOXA4Q00056 320 aaPredicted RBP4.96□□□□□ -1.62
CSMD1-215ENST00000537824 MMDQ15546 238 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 PIGYQ3MUY2 71 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 DGAT2L7PQ6IED9 249 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 ASCL4Q6XD76 172 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 DEFB132Q7Z7B7 95 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 ZP1P60852 638 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 FOXF1Q12946 379 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 MOB3BQ86TA1 216 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 HIST1H2BLQ99880 126 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 LPAR2Q9HBW0 351 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 EDIL3O43854 480 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 TGFAP01135 160 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 IGHV3-13P01766 116 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 IGHV3-7P01780 117 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 GPR183P32249 361 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 LINC00696Q6ZRV3 163 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 HIST3H2BBQ8N257 126 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 POC1AQ8NBT0 407 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 CDKN3Q16667 212 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 OR4D11Q8NGI4 311 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 CITED2Q99967 270 aaPredicted RBP4.96□□□□□ -1.62
CSMD1-215ENST00000537824 IL36GQ9NZH8 169 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 CA3P07451 260 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 ROM1Q03395 351 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 MGAT2Q10469 447 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.96□□□□□ -1.62
CSMD1-215ENST00000537824 VCX2Q9H322 139 aa4.96□□□□□ -1.62
CSMD1-215ENST00000537824 FCGR3AP08637 254 aa4.95□□□□□ -1.62
CSMD1-215ENST00000537824 RTP5Q14D33 572 aa4.95□□□□□ -1.62
CSMD1-215ENST00000537824 C10orf113Q5VZT2 155 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms